evaluate cNF clinical characteristics vs expression signatures

Sage-Bionetworks / NF_LandscapePaper_2019

This repository hosts all the code used to generate analyses and figures for the landscape paper

3 stars 1 forks source link

evaluate cNF clinical characteristics vs expression signatures #16

Closed allaway closed 4 years ago

allaway commented 4 years ago

immune deconvolution results, multiPLIER, gsva vs cNF clinical characteristics.

allaway commented 4 years ago

Closed by #21 . The itching results are pretty interesting, I think.

allaway commented 4 years ago

We opted to skip GSVA this go around but could revisit this later. The multiplier results seem to pull out a lot of biologically-defined LVs, so GSVA analysis would likely be redundant.