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Sage-Bionetworks / NF_LandscapePaper_2019

This repository hosts all the code used to generate analyses and figures for the landscape paper
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Adding random forest classification using latent variables (closes: #36) #42

Closed jaybee84 closed 4 years ago

jaybee84 commented 4 years ago

Model accuracy -92% Classes - Plexiform Neurofibroma and MPNST

allaway commented 4 years ago

No CHOP data. I can add an issue to add that in.

On Fri, Nov 8, 2019 at 8:31 AM Sara JC Gosline notifications@github.com wrote:

@sgosline approved this pull request.

It looks good - is this only tissue data? Or does it include cell line? Also, is the split in MPNSTs just a batch effect. Lastly, @allaway https://github.com/allaway does your analysis include the pNFs from CHOP?

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