Add four modules for target dashboard

Sage-Bionetworks / WallOfTargetsShiny

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Closed blogsdon closed 7 years ago

blogsdon commented 7 years ago

[x] 1. Module 1 - AMP-AD evidence (genetics/networks)
[x] 2. Module 2 - Druggability (also potentially Pharos, but primarily ODDI custom data)
[x] 3. Module 3 - Tissue specific gene and protein expression patterns of gene - GTEx
[x] 4. Module 4 - Assays and models available for a given target - (ODDI provided data as well)

blogsdon commented 7 years ago

@th1vairam do you know where the processed GTeX data is on Synapse?

kdaily commented 7 years ago

For Module 2/4, from DDI medium list.xlsx:

Use Gene name, cols E-I map color to status (red, green, orange, unknown/grey) - E-G are in module 2, H-I are in module 4.

Maybe an aggregate sum score for each module?

kdaily commented 7 years ago

For Pioneer targets Lilly drugabillity.xlsx just column D (module 2)

kdaily commented 7 years ago

Finished, except for aggregate score. Closing here, reopening as another issue.