tests are not running

[kdaily]

(annotator) [kdaily@tigger annotator]$ nosetests

----------------------------------------------------------------------
Ran 0 tests in 0.535s

OK
(annotator) [kdaily@tigger annotator]$ pytest 
============================================================================ test session starts =============================================================================
platform linux2 -- Python 2.7.14, pytest-3.4.0, py-1.5.2, pluggy-0.6.0
rootdir: /home/kdaily/src/annotator, inifile:
collected 0 items                                                                                                                                                            

======================================================================== no tests ran in 6.02 seconds ========================================================================

[teslajoy]

runs via nosetests -vs tests/integration/test_json2synapse.py:check_keys But I'll have to change it to pytest.

[kdaily]

OK! need to figure out how to register it in the appropriate way so that when new tests are added, all tests can be run via just pytest. Thanks!

[philerooski]

Tests fail for me unless I run them in the directory they live in. I think the root of the problem is the relative import of tests/sampleFile.csv and tests/sampleMeta.csv. Should we just include the contents of these files in conftest.py? I don't foresee them getting very large.

[teslajoy]

We need to make a conversion to not push code to master if the tests fail on py27 and py3

[philerooski]

I strongly agree, of course. Luckily for now it's just a file dependency issue and not the actual methods breaking. I'll work on getting that fixed today.

@teslajoy Is the test project at a point where it can be "set in stone" for consistent testing or should we just pull SAMPLE_FILE and SAMPLE_META from Github for now?

[teslajoy]

Pulling from github's master for now.

[teslajoy]

Much better, just have to reopen this issue since not all tests are passing yet.

[philerooski]

It looks like the tests are all passing in python 3 but the above tests fail for python2.7

[teslajoy]

I tested two hypothesis: scope issues with pytest conftest: I can get the syn, entities, sampleFiles, etc. so this is not the issue. incompatibility of pandas and pytest version: not true either. I see the df

Next up: uploading a file to synapse fails and returns HTTP 200 instead of ERROR we get FAILED via the pandas.testing. I think the files can't be stored and df doesn't exists.

not sure why py3 upload to synapse works.