Allows for monitoring of data uploaded via the dccvalidator application. Functions for getting information on the uploaded files, metadata validation status, and more.
I'm checking validations on the files for the Jax.IU.Pitt_Microbiome_pilot study and ran into an issue with the manifest file. When I validate the provided files, I get a warning that some columns in the manifest are completely empty, including analysisType (is in fact empty) and metadataType (is empty for ~1150 data fastq files but filled in with appropriate metadata types for the metadata files).
When I opened the manifest file in R, I confirmed that metadataType was filled in for the three metadata files and 'NA'.
I'll tell the data contributor not to worry about it and this isn't blocking anything, but I'm opening this issue to record it for future reference.
I'm checking validations on the files for the Jax.IU.Pitt_Microbiome_pilot study and ran into an issue with the manifest file. When I validate the provided files, I get a warning that some columns in the manifest are completely empty, including analysisType (is in fact empty) and metadataType (is empty for ~1150 data fastq files but filled in with appropriate metadata types for the metadata files).
When I opened the manifest file in R, I confirmed that metadataType was filled in for the three metadata files and 'NA'.
I'll tell the data contributor not to worry about it and this isn't blocking anything, but I'm opening this issue to record it for future reference.