search

Sage-Bionetworks / dccmonitor

Allows for monitoring of data uploaded via the dccvalidator application. Functions for getting information on the uploaded files, metadata validation status, and more.
https://sage-bionetworks.github.io/dccmonitor
Other
2 stars 4 forks source link

Bug with file details tab #48

Closed kelshmo closed 4 years ago

kelshmo commented 4 years ago

The app hosted on the shiny server is down - there are no output logs to help debug :)

I can run locally, however I return this error when I click on the Data Summary > File Details summary for any study. 

Warning: Error in : Can't find columns `variable`, `type`, `missing`, `complete`, `n`, … (and 4 more) in `.data`.
  106: <Anonymous>

The app worked fine one minute and then when I tried to reload 2 minutes later, it was down. I cannot find anything on the back end (in terms of dccvalidator uploads) that changed.

karawoo commented 4 years ago

What version of skimr are you using? I think that might be the issue that you are seeing locally.

karawoo commented 4 years ago

Also when you say the app is down, what exactly are you seeing? Is it the "disconnected from server" error? If you try logging out and back in to synapse, does that change anything? We've been seeing an increasing number of issues due to invalid session tokens; I'm not sure why this is happening, but it's possible that's the issue.

kelshmo commented 4 years ago

skimr 2.0.2

Yes, disconnected from the server error. I tried logging in and out to synapse and that did not resolve the "disconnected from server" error.

karawoo commented 4 years ago

If you restore to the version of skimr in the lockfile it should solve that local problem. Not sure what's causing the error on the server. Where is dccmonitor for PEC hosted, can you send me the URL?

kelshmo commented 4 years ago

Pulling in updates from master fixed the problem 🤷‍♀ !