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Sage-Bionetworks / sage-monorepo

Where OpenChallenges, Schematic, and other Sage open source apps are built
https://sage-bionetworks.github.io/sage-monorepo/
Apache License 2.0
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[Docs] Deploy OC stack 2023-10-02 #2191

Closed tschaffter closed 9 months ago

tschaffter commented 9 months ago

What product(s) is this documentation issue for?

OpenChallenges

Documentation issue

Description

No response

Is there a specific documentation page you are reporting?

No response

Anything else?

No response

Code of Conduct

tschaffter commented 9 months ago

Deployment

Previous stack

Commit ID:

ubuntu@openchallenges-preview-instance:~/sage-monorepo$ git rev-parse HEAD
0c441eba0bcb8ee15ec80a5c552c570fd13ccd9d

App config excerpt:

APP_VERSION="1.2.0-alpha"
DATA_UPDATED_ON="2023-09-14"

Docker images:

ubuntu@openchallenges-preview-instance:~/sage-monorepo$ docker images
REPOSITORY                                                     TAG       IMAGE ID       CREATED        SIZE
ghcr.io/sage-bionetworks/openchallenges-image-service          edge      cee174febaf2   2 weeks ago    322MB
ghcr.io/sage-bionetworks/openchallenges-organization-service   edge      f65379d6496d   2 weeks ago    355MB
ghcr.io/sage-bionetworks/openchallenges-challenge-service      edge      4ace04285f6c   2 weeks ago    357MB
ghcr.io/sage-bionetworks/openchallenges-app                    edge      accaacfe5b9c   2 weeks ago    28.1MB
ghcr.io/sage-bionetworks/openchallenges-api-gateway            edge      3d4efa0d2646   2 weeks ago    322MB
ghcr.io/sage-bionetworks/openchallenges-config-server          edge      50974331954f   2 months ago   307MB
ghcr.io/sage-bionetworks/openchallenges-apex                   edge      8da2b9c4c593   2 months ago   42.7MB
ghcr.io/sage-bionetworks/openchallenges-vault                  edge      4e076959741f   2 months ago   230MB
ghcr.io/sage-bionetworks/openchallenges-elasticsearch          edge      ce348c2d1b93   2 months ago   622MB
ghcr.io/sage-bionetworks/openchallenges-api-docs               edge      58bd040f9b64   2 months ago   33.6MB
ghcr.io/sage-bionetworks/openchallenges-mariadb                edge      7c8bae4d4f04   2 months ago   384MB
ghcr.io/sage-bionetworks/openchallenges-service-registry       edge      2fa8fbd37f93   2 months ago   321MB
ghcr.io/sage-bionetworks/openchallenges-zipkin                 edge      9eb6d33828b2   4 months ago   157MB
ghcr.io/sage-bionetworks/openchallenges-thumbor                edge      92aa7db974ed   5 months ago   606MB

Update stack

Pull current commit on main

git pull

Update app config in apps/openchallenges/app/.env.

Note Modified apps/openchallenges/challenge-service/.env and apps/openchallenges/organization-service/.env to allow loading the data from CSV files.

Note Modified apps/openchallenges/app/.env to include the new options related to SSR and CSR API URL.

Follow these instructions to authenticate with GHCR.

Remove the containers:

docker rm -f $(docker ps -aq)

Remove the images:

docker rmi -f $(docker images -aq)

Pull the edge images and start the stack:

OPENCHALLENGES_VERSION=edge ./docker/openchallenges/serve-detach.sh openchallenges-apex

Note Elasticsearch nodes may fail to start on first try. In that case, run the command again until all the containers are healthy.

New stack

Commit ID:

ubuntu@openchallenges-preview-instance:~/sage-monorepo$ git rev-parse HEAD
2db59290d938a79033de1f05280e340d0aab40b7

App config excerpt:

APP_VERSION="1.3.0-beta"
CSR_API_URL="http://localhost:8082/api/v1"
DATA_UPDATED_ON="2023-10-02"
ENVIRONMENT="production"
GOOGLE_TAG_MANAGER_ID="GTM-NBR5XD8C"
SSR_API_URL="http://openchallenges-api-gateway:8082/api/v1"

Docker images:

ubuntu@openchallenges-preview-instance:~/sage-monorepo$ docker images
REPOSITORY                                                     TAG       IMAGE ID       CREATED          SIZE
ghcr.io/sage-bionetworks/openchallenges-app                    edge      7e381a0c5e47   3 hours ago    197MB
ghcr.io/sage-bionetworks/openchallenges-image-service          edge      e694f7c8b106   3 hours ago    322MB
ghcr.io/sage-bionetworks/openchallenges-organization-service   edge      f4e8f470316a   3 hours ago    355MB
ghcr.io/sage-bionetworks/openchallenges-challenge-service      edge      1687dc25c58c   3 hours ago    357MB
ghcr.io/sage-bionetworks/openchallenges-api-gateway            edge      9d7a017b4b6a   3 hours ago    322MB
ghcr.io/sage-bionetworks/openchallenges-config-server          edge      50974331954f   2 months ago   307MB
ghcr.io/sage-bionetworks/openchallenges-apex                   edge      8da2b9c4c593   2 months ago   42.7MB
ghcr.io/sage-bionetworks/openchallenges-vault                  edge      4e076959741f   2 months ago   230MB
ghcr.io/sage-bionetworks/openchallenges-elasticsearch          edge      ce348c2d1b93   2 months ago   622MB
ghcr.io/sage-bionetworks/openchallenges-api-docs               edge      58bd040f9b64   2 months ago   33.6MB
ghcr.io/sage-bionetworks/openchallenges-mariadb                edge      7c8bae4d4f04   2 months ago   384MB
ghcr.io/sage-bionetworks/openchallenges-service-registry       edge      2fa8fbd37f93   2 months ago   321MB
ghcr.io/sage-bionetworks/openchallenges-zipkin                 edge      9eb6d33828b2   4 months ago   157MB
ghcr.io/sage-bionetworks/openchallenges-thumbor                edge      92aa7db974ed   5 months ago   606MB
tschaffter commented 9 months ago

Cross-Origin Request Blocked

I forgot to update the CSR_API_URL so that it uses the domain name openchallenges.io. The value of SSR_API_URL can stay as is because the request can be made locally.

The new config file:

$ cat apps/openchallenges/app/.env
APP_VERSION="1.3.0-beta"
CSR_API_URL="https://openchallenges.io/api/v1"
DATA_UPDATED_ON="2023-10-02"
ENVIRONMENT="production"
GOOGLE_TAG_MANAGER_ID="GTM-NBR5XD8C"
SSR_API_URL="http://openchallenges-api-gateway:8082/api/v1"