Sage-Bionetworks / sage-monorepo

Where OpenChallenges, Schematic, and other Sage open source apps are built
https://sage-bionetworks.github.io/sage-monorepo/
Apache License 2.0
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feat(openchallenges): add Mariadb Connection and Load the EDAM Concepts #2680

Open mdsage1 opened 1 month ago

mdsage1 commented 1 month ago

Description

EDAM ETL processes need to be developed to incorporate ETAM ontology in the Maria DB linking the ontology to existing data. This PR will address the load portion.

Related Issue

Contribute to #2524 Contribute to #2548

Fixes #2548

Changelog

  1. Create connection to MariaDB using Python
  2. Load the data in the Pandas dataframe that match the content of this file

Preview

image

sonarcloud[bot] commented 1 week ago

Quality Gate Passed Quality Gate passed for 'openchallenges-edam-etl'

Issues
0 New issues
0 Accepted issues

Measures
0 Security Hotspots
0.0% Coverage on New Code
0.0% Duplication on New Code

See analysis details on SonarCloud