Vignette for how to structure input data

Sage-Bionetworks / sageseqr

A workflow for exploring and analyzing RNA-seq data.

https://sage-bionetworks.github.io/sageseqr/

MIT License

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Open kelshmo opened 3 years ago

kelshmo commented 3 years ago

Describe the format of counts and metadata; emphasize the need for sample identifiers to match
Describe problems with missingness
Describe how the stepwise regression will consider all variables unless otherwise specified

kelshmo commented 3 years ago

Explain the problem with duplicate ensembl ids (e.g. pseudogenes).