all annotation changes to use CSV uploads.

Sage-Bionetworks / synAnnotationUtils

Apache License 2.0

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all annotation changes to use CSV uploads. #19

Closed kkdang closed 6 years ago

kkdang commented 7 years ago

Currently commands use annotation queries and set-annotations. Annotation queries will go away. All updates to annotations should create csv-format data that can be uploaded to a table view. No more calls to set-annotations.

teslajoy commented 7 years ago

syn python client functions to create or upload a file view needs to be implemented. Restful API exists: https://sagebionetworks.jira.com/wiki/display/PLFM/File+Views

teslajoy commented 7 years ago

current file-view jira wiki, calls to an old version of REAST api synapse docs.

most updated version can be found here: http://docs.synapse.org/rest/index.html

teslajoy commented 6 years ago

file/entity view (of type project or file) may be updated via https://github.com/Sage-Bionetworks/synAnnotationUtils/blob/master/synAnnotationUtils/update.py