Upgrade to synapseclient==2.0.0. This entails also upgrading PythonEmbedInR since synapseclient 2.0.0 now requires Python 3.6 and the existing bundled Python is 3.5.
TODO
[x] make code changes associated with the breaking/commented out vignettes (tables.Rmd) and some acl tests in synapser.Rmd
Upgrade to synapseclient==2.0.0. This entails also upgrading PythonEmbedInR since synapseclient 2.0.0 now requires Python 3.6 and the existing bundled Python is 3.5.
TODO
Tests currently pass http://jenkins.sagebase.org:8080/job/jkiang_synapser_dev/89/
Related: https://github.com/Sage-Bionetworks/PythonEmbedInR/pull/95