SainsburyWellcomeCentre / amap_python

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add mask to allow parametric sub-selection of atlas #18

Closed ederancz closed 6 years ago

ederancz commented 6 years ago

Add a CLI and GUI option to allow the use of only some parts of atlas - defined by AP coordinates maybe? This would allow registering scan where only part of the brain was acquired (eg OB only, CB only, isocortex only). As far as I understand this currently can only be done by a hack, modifying the atlas itself.