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SainsburyWellcomeCentre / amap_python

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The config files keeps default atlas location #24

Closed ablot closed 6 years ago

ablot commented 6 years ago

I ran python3 setup.py install --install-atlas --user --atlas-install-path /media/blota/raid_brainsaw/amap_atlas and both the config file in ./amap/config and that in ~/.amap kept the default 

[atlas]
    base_folder = '~/.amap/atlas/'

amap could not run (since the atlas is not there). Editing ~/.amap/amap.conf to specify the proper path solved the problem.