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SamStudio8 / reticulatus

A snakemake-based pipeline for assembling and polishing long genomes from long nanopore reads
MIT License
68 stars 5 forks source link

Read taxon summaries with kraken / ktkit #27

Closed SamStudio8 closed 4 years ago

SamStudio8 commented 4 years ago

harder than you think, thanks to the way I wrote the kraken and ktkit rules to be specific to {uuid}.{prefix}.fa files - nice one, me

SamStudio8 commented 4 years ago

suck it past me