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SamStudio8 / reticulatus

A snakemake-based pipeline for assembling and polishing long genomes from long nanopore reads
MIT License
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Per taxon final assembly coverage based on kraken / ktkit #28

Closed SamStudio8 closed 4 years ago

SamStudio8 commented 4 years ago

Implemented - but it regenerates the BAM. It would be good if we hooked into the overlap generation for racon et al.