Open SantosRAC opened 1 month ago
UPDATES: for studies that have equal number of runs in the transcriptome and in the microbiome datasets/matrices, currently CORALS is being used to compute Pearson correlations between genes and microbes (OTUs). Adaptations will be made pretty soon to also accommodate correlations with ASVs.
Add functions to internally compute correlations between OTU/ASV counts (transformed) and gene expression (transformed). After importing expression profiles and ASV/OTU counts, admins must be able to compute the correlations for pairs of gene - ASV/OTU.
Implementation involves: