Open dgslos opened 1 year ago
I got following issues:
Cloning CD-HIT submodule... Submodule 'external/cdhit' (https://github.com/weizhongli/cdhit.git) registered for path 'external/cdhit' Cloning into '/home/genomics/dslos/07_tools/decona/external/cdhit'... Building CD-HIT... In file included from cdhit-common.c++:28: In member function ‘void NVector<TYPE>::Resize(int, const TYPE&) [with TYPE = long int]’, inlined from ‘NVector<TYPE>::NVector(int, const TYPE&) [with TYPE = long int]’ at cdhit-common.h:119:10, inlined from ‘int local_band_align(char*, char*, int, int, ScoreMatrix&, int&, int&, int&, float&, int*, int, int, int, WorkingBuffer&)’ at cdhit-common.c++:815:36: cdhit-common.h:144:55: warning: argument 1 range [18446744056529682448, 18446744073709551608] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 144 | items = (TYPE*)realloc( items, capacity*sizeof(TYPE) ); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cdhit-common.h: In function ‘int local_band_align(char*, char*, int, int, ScoreMatrix&, int&, int&, int&, float&, int*, int, int, int, WorkingBuffer&)’: cdhit-common.h:144:55: note: in a call to built-in allocation function ‘void* __builtin_malloc(long unsigned int)’ Creating Python environment and installing packages, this might take a long time... UnsatisfiableError: The following specifications were found to be incompatible with each other: Output in format: Requested package -> Available versions Package _libgcc_mutex conflicts for: racon=1.4.13 -> libgcc-ng[version='>=7.3.0'] -> _libgcc_mutex[version='*|0.1|0.1',build='main|conda_forge'] python=3.8 -> libgcc-ng[version='>=11.2.0'] -> _libgcc_mutex[version='*|0.1|0.1',build='main|conda_forge'] medaka=1.1.2 -> libgcc-ng[version='>=7.5.0'] -> _libgcc_mutex[version='*|0.1|0.1',build='main|conda_forge'] minimap2=2.17 -> libgcc-ng[version='>=9.3.0'] -> _libgcc_mutex[version='*|0.1|0.1',build='main|conda_forge'] numpy=1.19 -> libgcc-ng[version='>=11.2.0'] -> _libgcc_mutex[version='*|0.1|0.1',build='main|conda_forge'] Package six conflicts for: numpy=1.19 -> mkl-service[version='>=2.3.0,<3.0a0'] -> six qcat=1.1.0 -> six medaka=1.1.2 -> h5py -> six[version='>=1.9'] Package pypy3.7 conflicts for: racon=1.4.13 -> python -> pypy3.7[version='7.3.3.*|7.3.4.*|7.3.5.*|7.3.7.*'] qcat=1.1.0 -> biopython -> pypy3.7[version='7.3.3.*|7.3.4.*|7.3.5.*|7.3.7.*|>=7.3.3|>=7.3.4|>=7.3.7|>=7.3.5'] numpy=1.19 -> pypy3.7[version='>=7.3.3|>=7.3.5|>=7.3.7'] numpy=1.19 -> python[version='>=3.7,<3.8.0a0'] -> pypy3.7[version='7.3.*|7.3.3.*|7.3.4.*|7.3.5.*|7.3.7.*'] nanofilt=2.7.1 -> biopython -> pypy3.7[version='7.3.3.*|7.3.4.*|7.3.5.*|7.3.7.*|>=7.3.3|>=7.3.4|>=7.3.7'] medaka=1.1.2 -> biopython -> pypy3.7[version='7.3.3.*|7.3.4.*|7.3.5.*|7.3.7.*|>=7.3.3|>=7.3.4|>=7.3.7|>=7.3.5'] Package python conflicts for: numpy=1.19 -> mkl-service[version='>=2.3.0,<3.0a0'] -> python[version='2.7.*|3.5.*|3.6.*|>=2.7,<2.8.0a0|>=3.10,<3.11.0a0|>=3.11,<3.12.0a0|>=3.5,<3.6.0a0|3.7.*|3.8.*|3.9.*'] medaka=1.1.2 -> biopython -> python[version='2.7.*|3.5.*|3.6.*|>=2.7,<2.8.0a0|>=3.10,<3.11.0a0|>=3.11,<3.12.0a0|>=3.9,<3.10.0a0|>=3.5,<3.6.0a0|3.4.*|3.9.16|3.8.16|3.9.10|3.8.12|3.7.12|3.7.10|3.7.10|3.6.12|3.7.9|3.6.12|3.6.9|3.6.9|3.6.9|3.6.9|>=2.7|>=3|3.7.*|>=3.6|>=3.7|>=3.7,<4.0|>=3.6,<4.0|3.8.*|3.11.*|3.9.*|3.10.*',build='4_73_pypy|5_73_pypy|1_73_pypy|0_73_pypy|0_73_pypy|5_73_pypy|3_73_pypy|2_73_pypy|1_73_pypy|0_73_pypy'] numpy=1.19 -> python[version='>=3.6,<3.7.0a0|>=3.7,<3.8.0a0|>=3.8,<3.9.0a0|>=3.9,<3.10.0a0'] qcat=1.1.0 -> biopython -> python[version='2.7.*|3.5.*|3.6.*|>=2.7,<2.8.0a0|>=3.10,<3.11.0a0|>=3.11,<3.12.0a0|>=3.6,<3.7.0a0|>=3.9,<3.10.0a0|>=3.8,<3.9.0a0|>=3.7,<3.8.0a0|>=3.5,<3.6.0a0|3.4.*|>=3.7.1,<3.8.0a0|<3.0.0'] racon=1.4.13 -> python nanofilt=2.7.1 -> python[version='>=3'] nanofilt=2.7.1 -> biopython -> python[version='2.7.*|3.5.*|3.6.*|>=2.7,<2.8.0a0|>=3.10,<3.11.0a0|>=3.11,<3.12.0a0|>=3.6,<3.7.0a0|>=3.9,<3.10.0a0|>=3.8,<3.9.0a0|>=3.7,<3.8.0a0|>=3.5,<3.6.0a0|3.4.*'] python=3.8 medaka=1.1.2 -> python[version='>=3.6,<3.7.0a0|>=3.7,<3.8.0a0|>=3.8,<3.9.0a0'] qcat=1.1.0 -> python Package libzlib conflicts for: python=3.8 -> libzlib[version='>=1.2.11,<1.3.0a0|>=1.2.13,<1.3.0a0'] minimap2=2.17 -> k8 -> libzlib[version='1.2.11|1.2.11|1.2.11|1.2.12|1.2.12|1.2.12|1.2.12|1.2.12|1.2.13|>=1.2.11,<1.3.0a0|>=1.2.13,<1.3.0a0',build='h36c2ea0_1012|h36c2ea0_1013|h166bdaf_0|h166bdaf_1|h166bdaf_4|h166bdaf_3|h166bdaf_2|h166bdaf_1014'] racon=1.4.13 -> python -> libzlib[version='1.2.11|1.2.11|1.2.11|1.2.12|1.2.12|1.2.12|1.2.12|1.2.12|1.2.13|>=1.2.11,<1.3.0a0|>=1.2.12,<1.3.0a0|>=1.2.13,<1.3.0a0',build='h36c2ea0_1012|h36c2ea0_1013|h166bdaf_0|h166bdaf_1|h166bdaf_4|h166bdaf_3|h166bdaf_2|h166bdaf_1014'] python=3.8 -> zlib[version='>=1.2.13,<1.3.0a0'] -> libzlib[version='1.2.11|1.2.11|1.2.11|1.2.12|1.2.12|1.2.12|1.2.12|1.2.12|1.2.13|>=1.2.12,<1.3.0a0',build='h36c2ea0_1012|h36c2ea0_1013|h166bdaf_0|h166bdaf_1|h166bdaf_4|h166bdaf_3|h166bdaf_2|h166bdaf_1014'] medaka=1.1.2 -> bcftools[version='>=1.9'] -> libzlib[version='1.2.11|1.2.11|1.2.11|1.2.12|1.2.12|1.2.12|1.2.12|1.2.12|1.2.13|>=1.2.11,<1.3.0a0|>=1.2.12,<1.3.0a0|>=1.2.13,<1.3.0a0',build='h36c2ea0_1012|h36c2ea0_1013|h166bdaf_0|h166bdaf_1|h166bdaf_4|h166bdaf_3|h166bdaf_2|h166bdaf_1014'] qcat=1.1.0 -> mappy -> libzlib[version='>=1.2.11,<1.3.0a0|>=1.2.12,<1.3.0a0|>=1.2.13,<1.3.0a0'] numpy=1.19 -> python[version='>=3.9,<3.10.0a0'] -> libzlib[version='>=1.2.11,<1.3.0a0|>=1.2.13,<1.3.0a0|>=1.2.12,<1.3.0a0'] nanofilt=2.7.1 -> python[version='>=3'] -> libzlib[version='>=1.2.11,<1.3.0a0|>=1.2.12,<1.3.0a0|>=1.2.13,<1.3.0a0'] Package numpy conflicts for: qcat=1.1.0 -> biopython -> numpy[version='1.10.*|1.12.*|>=1.11.3,<2.0a0|>=1.9.3,<2.0a0|>=1.14.1,<2.0a0|>=1.8|1.13.*|1.11.*|>=1.23,<2.0a0|>=1.20.3,<2.0a0|>=1.21,<2.0a0|>=1.16,<2.0a0|>=1.21.5,<2.0a0|>=1.19.2,<2.0a0|>=1.21.2,<2.0a0|>=1.20.2,<2.0a0|>=1.16.6,<2.0a0|>=1.15.4,<2.0a0|>=1.14.6,<2.0a0|>=1.13.3,<2.0a0|>=1.12.1,<2.0a0|>=1.9|>=1.21.6,<2.0a0|>=1.23.5,<2.0a0|>=1.23.4,<2.0a0|>=1.19.5,<2.0a0|>=1.18.5,<2.0a0|>=1.21.4,<2.0a0|>=1.17.5,<2.0a0|>=1.19.4,<2.0a0|>=1.16.5,<2.0a0|>=1.18.4,<2.0a0|>=1.18.1,<2.0a0|>=1.11.*|>=1.9.*|>=1.11|>=1.7'] medaka=1.1.2 -> numpy medaka=1.1.2 -> biopython -> numpy[version='1.10.*|1.12.*|>=1.11.3,<2.0a0|>=1.9.3,<2.0a0|>=1.14.1,<2.0a0|>=1.8|1.13.*|1.11.*|>=1.22.3,<2.0a0|>=1.21.5,<2.0a0|>=1.16.6,<2.0a0|>=1.21.2,<2.0a0|>=1.14.6,<2.0a0|>=1.20.3,<2.0a0|>=1.23.5,<2.0a0|>=1.21.6,<2.0a0|>=1.23.4,<2.0a0|>=1.19.5,<2.0a0|>=1.21.4,<2.0a0|>=1.18.5,<2.0a0|>=1.17.5,<2.0a0|>=1.19.4,<2.0a0|>=1.16.5,<2.0a0|>=1.19.2,<2.0a0|>=1.8,<1.14|>=1.11|>=1.8.1'] nanofilt=2.7.1 -> biopython -> numpy[version='1.10.*|1.12.*|>=1.11.3,<2.0a0|>=1.9.3,<2.0a0|>=1.14.1,<2.0a0|>=1.8|1.13.*|1.11.*|>1.8'] numpy=1.19 Package libcurl conflicts for: medaka=1.1.2 -> htslib[version='>=1.10.2,<1.11.0a0'] -> libcurl[version='>=7.64.1,<8.0a0|>=7.71.1,<8.0a0|>=8.1.0,<9.0a0|>=7.87.0,<8.0a0|>=7.86.0,<8.0a0|>=7.83.1,<8.0a0|>=7.82.0,<8.0a0|>=7.81.0,<8.0a0|>=7.79.1,<8.0a0|>=7.75.0,<8.0a0|>=7.69.1,<8.0a0'] qcat=1.1.0 -> pysam -> libcurl[version='>=7.69.1,<8.0a0|>=7.71.1,<8.0a0|>=7.75.0,<8.0a0|>=7.79.1,<8.0a0|>=7.81.0,<8.0a0|>=7.82.0,<8.0a0|>=7.83.1,<8.0a0|>=7.86.0,<8.0a0|>=7.87.0,<8.0a0|>=8.1.0,<9.0a0'] Package minimap2 conflicts for: minimap2=2.17 medaka=1.1.2 -> minimap2[version='>=2.17'] Package zlib conflicts for: racon=1.4.13 -> zlib[version='>=1.2.11,<1.3.0a0'] racon=1.4.13 -> python -> zlib[version='1.2.*|1.2.11|>=1.2.12,<1.3.0a0|>=1.2.13,<1.3.0a0|1.2.8|1.2.11.*'] Package expat conflicts for: numpy=1.19 -> pypy3.8[version='>=7.3.8'] -> expat[version='>=2.2.9,<3.0.0a0|>=2.3.0,<3.0a0|>=2.4.1,<3.0a0|>=2.4.7,<3.0a0|>=2.4.8,<3.0a0|>=2.4.9,<3.0a0|>=2.5.0,<3.0a0'] python=3.8 -> pypy3.8=7.3.11 -> expat[version='>=2.4.7,<3.0a0|>=2.4.8,<3.0a0|>=2.4.9,<3.0a0|>=2.5.0,<3.0a0'] Package libexpat conflicts for: python=3.8 -> pypy3.8=7.3.11 -> libexpat[version='>=2.5.0,<3.0a0'] racon=1.4.13 -> python -> libexpat[version='>=2.5.0,<3.0a0'] numpy=1.19 -> pypy3.8[version='>=7.3.8'] -> libexpat[version='>=2.5.0,<3.0a0'] qcat=1.1.0 -> python -> libexpat[version='>=2.5.0,<3.0a0'] nanofilt=2.7.1 -> python[version='>=3'] -> libexpat[version='>=2.5.0,<3.0a0'] Package reportlab conflicts for: qcat=1.1.0 -> biopython -> reportlab nanofilt=2.7.1 -> biopython -> reportlab medaka=1.1.2 -> biopython -> reportlab Package libstdcxx-ng conflicts for: racon=1.4.13 -> python -> libstdcxx-ng[version='>=11.2.0|>=7.5.0|>=7.2.0|>=9.3.0|>=9.4.0|>=4.9'] racon=1.4.13 -> libstdcxx-ng[version='>=7.3.0'] Package libgcc-ng conflicts for: racon=1.4.13 -> python -> libgcc-ng[version='>=10.3.0|>=11.2.0|>=7.5.0|>=7.2.0|>=12|>=9.4.0|>=9.3.0|>=4.9'] racon=1.4.13 -> libgcc-ng[version='>=7.3.0'] Package curl conflicts for: medaka=1.1.2 -> bcftools[version='>=1.9'] -> curl[version='>=7.59.0,<8.0a0|>=7.64.0,<8.0a0|>=7.64.1,<8.0a0'] qcat=1.1.0 -> pysam -> curl[version='>=7.59.0,<8.0a0|>=7.64.0,<8.0a0|>=7.64.1,<8.0a0|>=7.87.0,<8.0a0|>=7.83.1,<8.0a0|>=7.81.0,<8.0a0|>=7.76.0,<8.0a0|>=7.71.1,<8.0a0|>=7.69.1,<8.0a0|>=7.75.0,<8.0a0'] python=3.8 -> graalpy[version='>=22.3.0,<22.3.1.0a0'] -> curl Package tzdata conflicts for: qcat=1.1.0 -> python -> tzdata racon=1.4.13 -> python -> tzdata nanofilt=2.7.1 -> python[version='>=3'] -> tzdata numpy=1.19 -> python[version='>=3.9,<3.10.0a0'] -> tzdata Package pandas conflicts for: qcat=1.1.0 -> pandas nanofilt=2.7.1 -> nanoget[version='>=0.15.0'] -> pandas[version='>=0.22.0'] Package ca-certificates conflicts for: python=3.8 -> openssl[version='>=1.1.1t,<1.1.2a'] -> ca-certificates racon=1.4.13 -> python -> ca-certificates qcat=1.1.0 -> python -> ca-certificates Package htslib conflicts for: medaka=1.1.2 -> bcftools[version='>=1.9'] -> htslib[version='>=1.10,<1.11.0a0|>=1.10.1,<1.11.0a0|>=1.11,<1.12.0a0|>=1.12,<1.13.0a0|>=1.13,<1.14.0a0|>=1.14,<1.15.0a0|>=1.15,<1.16.0a0|>=1.16,<1.17.0a0|>=1.17,<1.18.0a0|>=1.9,<1.10.0a0'] medaka=1.1.2 -> htslib[version='>=1.10.2,<1.11.0a0'] Package numpy-base conflicts for: numpy=1.19 -> numpy-base[version='1.19.1|1.19.1|1.19.1|1.19.1|1.19.1|1.19.1|1.19.2|1.19.2|1.19.2|1.19.2|1.19.2|1.19.2|1.19.2|1.19.2|1.19.2|1.19.2|1.19.2|1.19.2|1.19.2|1.19.2|1.19.5',build='py38hfa32c7d_0|py37h75fe3a5_0|py37hfa32c7d_0|py38hfa32c7d_0|py39h2ae0177_0|py39h0f7b65f_0|py37h4c65ebe_1|py38h21a3de8_4|py38h622ebfc_4|py37h622ebfc_4|py38hfdd66db_5|py39hfdd66db_5|py39h622ebfc_4|py37h21a3de8_4|py39h21a3de8_4|py38h21a3de8_1|py39h21a3de8_1|py37h21a3de8_1|py38h4c65ebe_1|py39h4c65ebe_1|py36hfa32c7d_0|py36h75fe3a5_0|py37h75fe3a5_0|py38h75fe3a5_0|py36h75fe3a5_0|py36hfa32c7d_0|py38h75fe3a5_0|py37hfa32c7d_0'] numpy=1.19 -> mkl_fft -> numpy-base[version='>=1.0.14,<2.0a0|>=1.0.6,<2.0a0|>=1.2.1,<2.0a0|>=1.0.2,<2.0a0|>=1.0.4,<2.0a0'] medaka=1.1.2 -> numpy -> numpy-base[version='1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.11.3|1.14.3|1.14.3|1.14.3|1.14.3|1.14.3|1.14.3|1.14.4|1.14.4|1.14.4|1.14.4|1.14.4|1.14.4|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.5|1.14.6|1.14.6|1.14.6|1.14.6|1.14.6|1.14.6|1.14.6|1.14.6|1.14.6|1.14.6|1.14.6|1.14.6|1.14.6|1.14.6|1.14.6|1.14.6|1.15.0|1.15.0|1.15.0|1.15.0|1.15.0|1.15.0|1.15.0|1.15.0|1.15.1|1.15.1|1.15.1|1.15.1|1.15.1|1.15.1|1.15.1|1.15.1|1.15.1|1.15.1|1.15.1|1.15.1|1.15.2|1.15.2|1.15.2|1.15.2|1.15.2|1.15.2|1.15.2|1.15.2|1.15.2|1.15.2|1.15.2|1.15.2|1.15.2|1.15.2|1.15.3|1.15.3|1.15.3|1.15.3|1.15.3|1.15.3|1.15.4|1.15.4|1.15.4|1.15.4|1.15.4|1.15.4|1.15.4|1.15.4|1.15.4|1.16.0|1.16.0|1.16.0|1.16.0|1.16.0|1.16.0|1.16.0|1.16.0|1.16.0|1.16.0|1.16.0|1.16.0|1.16.1|1.16.1|1.16.1|1.16.1|1.16.1|1.16.1|1.16.1|1.16.1|1.16.1|1.16.1|1.16.1|1.16.1|1.16.2|1.16.2|1.16.2|1.16.2|1.16.2|1.16.2|1.16.3|1.16.3|1.16.3|1.16.3|1.16.3|1.16.3|1.16.4|1.16.4|1.16.4|1.16.4|1.16.4|1.16.4|1.16.5|1.16.5|1.16.5|1.16.5|1.16.5|1.16.5|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.16.6|1.17.2.*|1.17.3.*|1.17.4.*|1.18.1.*|1.18.5.*|1.19.1|1.19.1|1.19.1|1.19.1|1.19.1|1.19.1|1.19.2|1.19.2|1.19.2|1.19.2|1.19.2|1.19.2|1.19.2|1.19.2|1.19.2|1.19.2|1.19.2|1.19.2|1.19.2|1.19.2|1.19.5|1.19.5|1.19.5|1.19.5|1.19.5|1.19.5|1.19.5|1.19.5|1.20.1|1.20.1|1.20.1|1.20.1|1.20.1|1.20.1|1.20.2|1.20.2|1.20.2|1.20.2|1.20.2|1.20.2|1.20.3|1.20.3|1.20.3|1.20.3|1.20.3|1.20.3|1.20.3|1.20.3|1.21.2|1.21.2|1.21.2|1.21.2|1.21.2|1.21.2|1.21.2|1.21.2|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.21.5|1.22.3|1.22.3|1.22.3|1.22.3|1.22.3|1.22.3|1.22.3|1.22.3|1.22.3|1.22.3|1.22.3|1.23.1|1.23.1|1.23.1|1.23.1|1.23.1|1.23.1|1.23.3|1.23.3|1.23.3|1.23.3|1.23.3|1.23.3|1.23.3|1.23.3|1.23.3|1.23.3|1.23.3|1.23.3|1.23.4|1.23.4|1.23.4|1.23.4|1.23.4|1.23.4|1.23.5|1.23.5|1.23.5|1.23.5|1.23.5|1.23.5|1.23.5|1.23.5|1.23.5|1.23.5|1.23.5|1.23.5|1.24.3|1.9.3|1.9.3|1.9.3|1.9.3|1.9.3|1.9.3|1.9.3|1.9.3|1.9.3|1.9.3|1.9.3|1.9.3|1.9.3|1.9.3|>=1.9.3,<2.0a0|1.17.0|1.17.0|1.17.0|1.17.0',build='py37hde5b4d6_0|py36h2b20989_6|py37h2b20989_6|py27hdbf6ddf_7|py27h2b20989_7|py27h2b20989_7|py27hdbf6ddf_7|py36hdbf6ddf_7|py37hdbf6ddf_7|py36h2b20989_8|py37hdbf6ddf_8|py27h2b20989_8|py27hdbf6ddf_8|py35hdbf6ddf_8|py36h7cdd4dd_9|py37h7cdd4dd_9|py36h3dfced4_9|py36h81de0dd_9|py37h81de0dd_9|py35h74e8950_9|py36h74e8950_9|py35h81de0dd_9|py36h74e8950_10|py36h81de0dd_10|py35h81de0dd_10|py36h2f8d375_10|py27h2f8d375_10|py35h2f8d375_10|py36h2f8d375_11|py27hde5b4d6_11|py37h2f8d375_12|py36h2f8d375_12|py37hde5b4d6_12|py36hde5b4d6_12|py38hde5b4d6_12|py38h2f8d375_12|py36h0ea5e3f_1|py35h0ea5e3f_1|py36h9be14a7_1|py27h9be14a7_1|py27h2b20989_0|py36h2b20989_0|py36h2b20989_0|py27h2b20989_0|py36hdbf6ddf_1|py27h2b20989_1|py27h2b20989_2|py36h2b20989_2|py37h2b20989_2|py27hdbf6ddf_2|py37hdbf6ddf_2|py36hdbf6ddf_2|py36h2b20989_3|py37h2b20989_3|py37hdbf6ddf_3|py37h2b20989_4|py35hdbf6ddf_4|py37h2f8d375_4|py27h81de0dd_4|py27h2f8d375_4|py35h81de0dd_4|py37h81de0dd_4|py36h81de0dd_4|py27h2f8d375_5|py27hde5b4d6_5|py27h7cdd4dd_0|py37h7cdd4dd_0|py36h3dfced4_0|py35h3dfced4_0|py37h3dfced4_0|py37h74e8950_0|py37h81de0dd_0|py35h2f8d375_0|py27h2f8d375_0|py35h2f8d375_0|py36h2f8d375_1|py27h2f8d375_1|py27h81de0dd_1|py36h81de0dd_1|py37h2f8d375_1|py27h81de0dd_0|py36h81de0dd_0|py37h81de0dd_0|py27h81de0dd_0|py36hde5b4d6_0|py37hde5b4d6_0|py27h2f8d375_0|py37hde5b4d6_0|py37h2f8d375_1|py36h2f8d375_1|py37hde5b4d6_1|py36hde5b4d6_1|py27h2f8d375_0|py36hde5b4d6_0|py37hde5b4d6_0|py27h2f8d375_1|py37h2f8d375_1|py37hde5b4d6_1|py27h2f8d375_0|py37hde5b4d6_0|py36hde5b4d6_0|py27h2f8d375_0|py37hde5b4d6_0|py27h2f8d375_0|py37hde5b4d6_0|py36hde5b4d6_0|py37hde5b4d6_0|py36hde5b4d6_0|py37hde5b4d6_0|py36hde5b4d6_0|py38h2f8d375_0|py27h2f8d375_0|py39h41b4c56_3|py38h41b4c56_3|py37h41b4c56_3|py38hdc34a94_3|py39hdc34a94_3|py37hdc34a94_3|py39ha8aedfd_4|py38ha8aedfd_4|py37h73d599e_4|py39h73d599e_4|py38hfdd66db_5|py39hfdd66db_5|py37hfa32c7d_0|py38hfa32c7d_0|py37hfa32c7d_0|py38hfa32c7d_0|py39h2ae0177_0|py37h4c65ebe_1|py37h21a3de8_1|py38h21a3de8_4|py39h622ebfc_4|py38hfdd66db_5|py39hfdd66db_5|py39h34387ca_0|py38h34387ca_0|py38h7d8b39e_0|py37hfae3a4d_0|py39hfae3a4d_0|py37h74d4b33_0|py38h39b7dee_0|py37h39b7dee_0|py38h7e635b3_1|py37h2b8c604_0|py39h2b8c604_0|py37h79a1101_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Package biopython conflicts for: medaka=1.1.2 -> whatshap[version='>=0.18'] -> biopython[version='>=1.73'] medaka=1.1.2 -> biopython Package pysam conflicts for: medaka=1.1.2 -> pysam[version='>=0.16.0.1'] medaka=1.1.2 -> whatshap[version='>=0.18'] -> pysam[version='0.16.*|>=0.17|>=0.15']The following specifications were found to be incompatible with your system: - feature:/linux-64::__glibc==2.35=0 - medaka=1.1.2 -> libgcc-ng[version='>=7.5.0'] -> __glibc[version='>=2.17'] - medaka=1.1.2 -> tensorflow[version='>=2.2.0'] -> __cuda - minimap2=2.17 -> libgcc-ng[version='>=9.3.0'] -> __glibc[version='>=2.17'] - numpy=1.19 -> libgcc-ng[version='>=11.2.0'] -> __glibc[version='>=2.17'] - python=3.8 -> libgcc-ng[version='>=11.2.0'] -> __glibc[version='>=2.17'] - racon=1.4.13 -> libgcc-ng[version='>=7.3.0'] -> __glibc[version='>=2.17'] Your installed version is: 2.35 Note that strict channel priority may have removed packages required for satisfiability.
I got following issues: