How to get Hub gene of co-expression module

SatwikAch / SpaceX

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How to get Hub gene of co-expression module #1

Open hzongyao opened 2 years ago

hzongyao commented 2 years ago

Thank you very much for your work, and I would like to ask you how to reproduce the images of the tumor results you analyzed in the article and How to get Hub gene of co-expression module ?

SatwikAch commented 1 year ago

You can use the connectivity matrix (can be defined as number of edges for each node) to find the top hub genes and modules can be identified by following the steps from section 4.3 of this website (https://kateto.net/network-visualization).