Scalable Cytometry Image Processing (SCIP) is an open-source tool that implements an image processing pipeline on top of Dask, a distributed computing framework written in Python. SCIP performs projection, illumination correction, image segmentation and masking, and feature extraction.
Minima and maxima can be computed exactly over all partitions per file. If no outlier pixel values are expected (or data has been cleaned beforehand) this can be used.
Minima and maxima can be computed exactly over all partitions per file. If no outlier pixel values are expected (or data has been cleaned beforehand) this can be used.