codecov-commenter
commented
2 years ago Codecov Report
Merging #52 (dcabe7e) into master (baafc1a) will decrease coverage by
2.48%. The diff coverage is56.98%.
@@ Coverage Diff @@
## master #52 +/- ##
==========================================
- Coverage 49.27% 46.79% -2.49%
==========================================
Files 23 24 +1
Lines 1106 1030 -76
==========================================
- Hits 545 482 -63
+ Misses 561 548 -13 | Impacted Files | Coverage Δ | |
|---|---|---|
| src/scip/masking/sobel.py | 0.00% <0.00%> (ø) |
|
| src/scip/masking/watershed.py | 0.00% <0.00%> (-32.36%) |
:arrow_down: |
| src/scip/projection/op.py | 66.66% <ø> (ø) |
|
| src/scip/segmentation/cellpose.py | 15.87% <ø> (-3.83%) |
:arrow_down: |
| src/scip/features/intensity.py | 41.81% <11.76%> (-1.32%) |
:arrow_down: |
| src/scip/masking/spot.py | 29.26% <29.26%> (ø) |
|
| src/scip/masking/circle.py | 36.36% <36.36%> (ø) |
|
| src/scip/masking/threshold.py | 31.57% <40.00%> (+1.57%) |
:arrow_up: |
| src/scip/loading/util.py | 38.88% <50.00%> (-55.56%) |
:arrow_down: |
| src/scip/loading/zarr.py | 48.93% <50.00%> (-17.74%) |
:arrow_down: |
| ... and 14 more |
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Major refactor to improve maintainability and mix-and-matching of pipeline steps for all input file types. The latter is achieved by moving preprocessing steps out of data loaders into separate modules.