Scalable Cytometry Image Processing (SCIP) is an open-source tool that implements an image processing pipeline on top of Dask, a distributed computing framework written in Python. SCIP performs projection, illumination correction, image segmentation and masking, and feature extraction.
We will use
pytest
to write unit tests. Some core functionality shoud already be tested in the alpha release.We will use the
coverage
package to monitor code coverage.