Scalable Cytometry Image Processing (SCIP) is an open-source tool that implements an image processing pipeline on top of Dask, a distributed computing framework written in Python. SCIP performs projection, illumination correction, image segmentation and masking, and feature extraction.
Neural networks which are pretrained on bioimaging data can contain meaningful intermediate representations. This feature would allow users to supply a pretrained network and specify which intermediate representation they would like to extract.
Neural networks which are pretrained on bioimaging data can contain meaningful intermediate representations. This feature would allow users to supply a pretrained network and specify which intermediate representation they would like to extract.