Get SILVA reference files - Githubissues

SchlossLab / Schloss_rrnAnalysis_mSphere_2021

Code Club project analyzing utility of ASVs

MIT License

8 stars 4 forks source link

Get SILVA reference files #2

Closed pschloss closed 4 years ago

pschloss commented 4 years ago

Need SILVA reference alignment to align our sequences from the rrnDB so that we can make sure we're looking at a consistent region within the gene. We can get this from the mothur wiki. We would like the recreated SEED database from Release 138:

https://mothur.s3.us-east-2.amazonaws.com/wiki/silva.seed_v138.tgz

Put this into /data/references