Generate resource list related to ASVs - Githubissues

SchlossLab / Schloss_rrnAnalysis_mSphere_2021

Code Club project analyzing utility of ASVs

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Generate resource list related to ASVs #5

Open pschloss opened 4 years ago

pschloss commented 4 years ago

Need to create a bibliography of resources related to oligotypes, ASVs, and ESVs and other related topics

Huse SLP: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2909393/
Eran: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3864673/
Callahan ASVs: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5702726/
Fierer heterogeneity: http://fiererlab.org/2017/10/09/intragenomic-heterogeneity-and-its-implications-for-esvs/
Fierer lumping/splitting: http://fiererlab.org/2017/05/02/lumping-versus-splitting-is-it-time-for-microbial-ecologists-to-abandon-otus/
Sun heterogeneity: https://aem.asm.org/content/79/19/5962.abstract

pschloss commented 4 years ago

Langille group Denoising the Denoisers: https://peerj.com/articles/5364/

pschloss commented 4 years ago

Glassman - Broadscale Ecological Patterns Are Robust to Use of Exact Sequence Variants versus Operational Taxonomic Units: https://msphere.asm.org/content/3/4/e00148-18

pschloss commented 4 years ago

Denef - https://www.frontiersin.org/articles/10.3389/fmicb.2017.00365/full