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SchlossLab / ipython-mothurmagic

IPython extension for running mothur commands in an IPython notebook
GNU General Public License v3.0
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Feature/enable current #4

Open campenr opened 8 years ago

campenr commented 8 years ago

This pull request address issue #2. It enables persistence of mothurs current variables (including directories) across execution of different notebook cells. It can also allow persistence across notebooks sessions by saving variables to file. I have set saving to file as False by default for now.

I have also made changes to the example notebook in the repo to reflect the new functionality (the install line will need to be updated to match the master repo if this pull request is accepted).

campenr commented 8 years ago

The changes made in this pull request appear to be compatible with mothur 1.37.0.