SchmollerLab Cell_ACDC issues

SchmollerLab / Cell_ACDC

A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data

BSD 3-Clause "New" or "Revised" License

127 stars 21 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Export to video on mac fails

#560 ElpadoCan opened 1 day ago
0
small changes for clarity

#559 Teranis closed 1 day ago
0
Failed exporting to video not reported

#558 ElpadoCan opened 1 day ago
0
Do not disable tools in max projection if segmentation is 2D

#557 ElpadoCan opened 1 day ago
0
Second viewer window not working

#556 ElpadoCan opened 1 day ago
0
Allow to view isometric z planes

#555 ElpadoCan opened 4 days ago
0
Small fixes for ruler in gui and saving npz in resize

#554 Teranis closed 1 week ago
0
Auto scale LUTs

#553 ElpadoCan closed 1 week ago
0
ERROR Manual bud seperation tool

#552 AlissaFinster closed 2 weeks ago
3
Bug fixes and additional functionality for Normal Division: Lineage Tree, refactor setTitleText

#551 Teranis closed 2 weeks ago
0
Switching planes with overlay on causes overlay to be active when going back to xy

#549 ElpadoCan closed 1 month ago
0
Viewing segmentation contours in other planes (xz and yz)

#548 ArohiKhurana closed 2 weeks ago
0
Error received while shifting from xz plane to xy plane

#547 ArohiKhurana closed 1 week ago
0
"Annotate cell as dead" gets removed from marked cell after certain actions

#546 Teranis opened 1 month ago
0
Title now has tooltip so you can view full ID lists and posData.tracked_lost_centroids[frame_i] fix

#545 Teranis closed 1 month ago
0
When displaying lost IDs, acc. missing IDs etc. in the title, one can now hover over it to see untrimmed lists

#544 Teranis closed 1 month ago
1
Save model used and parameters of model for segmentation and tracking

#543 Teranis opened 1 month ago
1
Error when trying to edit scale bar properties

#542 ElpadoCan closed 1 month ago
0
Trackastra as real-time tracker

#541 ElpadoCan opened 2 months ago
0
Loading other position of same file (Shift+P) in dataprep bug

#540 Beno71 opened 2 months ago
0
Add trackastra tracker

#539 ElpadoCan closed 2 months ago
0
Propagating deletion of cells causes errors

#538 Teranis opened 2 months ago
2
Minor bug fixes and improvements for symmetrical and resize

#537 Teranis closed 2 months ago
0
Fiji macros should save additional metadata

#536 ElpadoCan closed 2 months ago
0
Skipping alignment in dataprep takes too long

#535 ElpadoCan closed 2 months ago
0
0 values were rendered by ACDC when measuring fluorescent signals.

#534 CorneliusWang753 opened 2 months ago
1
Utility to resize images (up or downscale)

#533 ElpadoCan closed 2 months ago
0
Normal division tracker should ask to save annotations or not when re-tracking in GUI

#532 ElpadoCan opened 2 months ago
0
Dataprep save alignment only if user clicks on save button

#531 ElpadoCan closed 2 months ago
0
Could not install on macOS 10.14.6

#530 jacobmhkim closed 2 months ago
16
Extended support for normal division tracker

#529 Teranis closed 2 months ago
0
Add skip segmentation button to perform only tracking in segmentation module

#528 ElpadoCan closed 2 months ago
0
Allow saving and loading SAM embedding s

#527 ElpadoCan opened 3 months ago
0
Utility to convert ImageJ ROI files to segmentation files

#526 ElpadoCan closed 2 months ago
0
Allow specifying Fiji location in case already present on macOS

#525 ElpadoCan opened 4 months ago
0
Export to Video does not work when starting from frame that is not current one

#523 ElpadoCan closed 4 months ago
0
Drag timestamp and scale bar relative to click position

#522 ElpadoCan closed 4 months ago
0
Timestamp is not removed

#521 ElpadoCan closed 4 months ago
0
Create data structure on macOS by automatic downloading Fiji.app and run macro headless

#520 ElpadoCan closed 2 months ago
0
New tracker tracking first groups and then objects relative to each other within groups

#519 ElpadoCan opened 4 months ago
0
Export to video scrolling through z-slices

#517 ElpadoCan closed 5 months ago
0
Visualization bug manual background

#516 ElpadoCan closed 5 months ago
0
Allow saving multiple crops in different folders

#515 ElpadoCan closed 5 months ago
0
Export to video

#514 ElpadoCan closed 5 months ago
0
Add timestamp

#513 ElpadoCan closed 5 months ago
0
Detect time points split into multiple files and recommend best course of action

#512 ElpadoCan closed 5 months ago
1
Error in opening folder for segmentation

#511 NidhiChopdekar opened 5 months ago
2
How to convert npz to COCO format

#510 ptlzon opened 5 months ago
1
Error in function `gui_mouseReleaseEventImg1` v1.4.27

#509 Akankshazmaze closed 5 months ago
14
Launch Cellpose GUI from Cell-ACDC GUI

#508 ElpadoCan closed 5 months ago
0