I tried to run your snakemake pipeline on the jaffal-simulated datasets, however, it failed in different scripts, I corrected all of those ones (https://github.com/SchulzLab/Aeron/compare/master...qinqian:Aeron:master), and able to run it. However, it failed to generate any gene fusions. Are you still maintaining the software? Thanks for your feedbacks.
Hi Aeron developers,
I tried to run your snakemake pipeline on the jaffal-simulated datasets, however, it failed in different scripts, I corrected all of those ones (https://github.com/SchulzLab/Aeron/compare/master...qinqian:Aeron:master), and able to run it. However, it failed to generate any gene fusions. Are you still maintaining the software? Thanks for your feedbacks.
Best, Alvin