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SciCompMod / memilio

Modular spatio-temporal models for epidemic and pandemic simulations
https://scicompmod.github.io/memilio/
Apache License 2.0
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GNNs as surrogate models #614

Open AgathaSchmidt opened 1 year ago

AgathaSchmidt commented 1 year ago

Additionally to our projects regarding the surrogate models for modelling the spread of Covid 19 in one population, we want to introduce Graph Neural Nets (GNNs). GNNs are usefool tools for graph-like data. We want to model the spread of Covid19 among all counties in Germany. The spatial information about the counties and its neighbors can be modelled by a Graph. We want to include the mobiliy between the counties.

The task of predicting the spread among 400 counties and condsidering the mobility between them is different and more complex that predicting for only one population. This is why we don't continue the previous work, but rather replicate the process. However, we skipped the step where we do not differentiate between age groups. (Maybe add that ?? )

GNNs with no damping -> issue #850 grid search for GNNs --> issue #851 GNNs with dampings --> issue #852

mknaranja commented 4 months ago

@AgathaSchmidt Most of these tasks have already been started or even completed? Could you update the status on the right bar and link the branch to the particular issues (also on the right bar)?