Can handle both fastq.gz and fq.gz - Githubissues

SciLifeLab / Sarek

Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing

https://nf-co.re/sarek

MIT License

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Can handle both fastq.gz and fq.gz #798

Closed maxulysse closed 5 years ago

maxulysse commented 5 years ago

Add possibility to use fq.gz too
Fix #797

PR checklist

[X] PR is made against dev branch
[X] This comment contains a description of changes (with reason)
[X] Ensure the test suite passes (./scripts/test.sh -p docker -t ALL).
[ ] Documentation in docs is updated
[x] CHANGELOG.md is updated