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SciLifeLab / facs

Fast and Accurate Classification of Sequences using Bloom filters
http://facs.scilifelab.se/
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Accuracy plots #108

Closed brainstorm closed 10 years ago

brainstorm commented 10 years ago

Please have a look at the new accuracy plots:

http://nbviewer.ipython.org/github/brainstorm/facs/blob/269f1da73/facs/utils/benchmarks_facs.ipynb?create=1

As can be appreciated in the plots, both FACS and Fastq_screen are pretty much alike in terms of accuracy... FACS clearly beats Fastq_screen in performance, paying a price on storage though (to be done by @guillermo-carrasco on issue #105).

@henrikstranneheim, @arvestad, @luhugerth, #reviewthis

mariogiov commented 10 years ago

I just want to say I am having a love affair with this ipython notebook. What a rad feature.

brainstorm commented 10 years ago

@mariogiov <3 Norvig: http://nbviewer.ipython.org/url/norvig.com/ipython/Economics.ipynb