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SciML / Catalyst.jl

Chemical reaction network and systems biology interface for scientific machine learning (SciML). High performance, GPU-parallelized, and O(1) solvers in open source software.
https://docs.sciml.ai/Catalyst/stable/
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[v14 - Ready] Go through broken tests #930

Closed TorkelE closed 3 weeks ago

TorkelE commented 3 weeks ago

I go through broken tests. A few have been fixed/wasn't actually a problem. These are re-activated/now fixed here. For the broken ones I link the issue. I will also list the relevant issues here, as well as create a Catalyst issue listing them all: https://github.com/SciML/ModelingToolkit.jl/issues/1761 https://github.com/SciML/ModelingToolkit.jl/issues/2612 https://github.com/SciML/ModelingToolkit.jl/issues/2614 https://github.com/SciML/ModelingToolkit.jl/issues/2778 https://github.com/SciML/ModelingToolkit.jl/issues/2779 https://github.com/SciML/SciMLBase.jl/issues/662 https://github.com/SciML/SciMLBase.jl/issues/709 https://github.com/SciML/SciMLBase.jl/issues/710 https://github.com/SciML/SciMLBase.jl/issues/711 https://github.com/SciML/JumpProcesses.jl/issues/417 https://github.com/SciML/SteadyStateDiffEq.jl/issues/79

Latexify tests will be considered separately.

There are still 2 cases I need to figure out. I also need to go through and check everything and add some comments. Right now I am too exhausted to continue/think straight though, will finish tomorrow.

TorkelE commented 3 weeks ago

Except for the weird case where MTK scambles jump parameter orders, this is ready.

TorkelE commented 3 weeks ago

Thanks!