SciML / Catalyst.jl

Chemical reaction network and systems biology interface for scientific machine learning (SciML). High performance, GPU-parallelized, and O(1) solvers in open source software.
https://docs.sciml.ai/Catalyst/stable/
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add option to generate propensity functions for CLE models #986

Open isaacsas opened 4 months ago

isaacsas commented 4 months ago

Currently I believe we generate CLE models using ODE ratelaws, but in some cases one might actually want to use the underlying propensity functions. We should both document this more clearly and add an option to use propensity functions instead.