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SciML / ReactionNetworkImporters.jl

Julia Catalyst.jl importers for various reaction network file formats like BioNetGen and stoichiometry matrices
https://docs.sciml.ai/ReactionNetworkImporters/stable/
MIT License
26 stars 8 forks source link

I'd like to get this rxn stoichiometry into Julia #81

Closed feeburn1 closed 1 year ago

feeburn1 commented 2 years ago

...convert to rate equations and then use phys props datasheet to calk Keq and ks from LFER rxn.txt is the stoichiometry, rate is set of rate eqn (dydt), LHHW is has the adsorbtion denominator. could you see what it would take to creat the odes in Julia? I have a proplist.dat that has Hform, Gform, S for each species to get Keq

LHHW.txt rate.txt rxn.txt

isaacsas commented 2 years ago

These seem to be in some other file format, so you’d have to convert them to work with Catalyst or ReactionNetworkImporters.

isaacsas commented 2 years ago

I suggest looking through the first three Catalyst tutorials starting with https://catalyst.sciml.ai/stable/tutorials/using_catalyst/. This should show you how to specify reactions in Catalyst, and hopefully make it clearer how to covert over your current input files.

feeburn1 commented 2 years ago

Ok, thanks. They are asci text files giving the stoichiometry.

I'll take a look.

On Fri, Aug 26, 2022 at 2:35 PM Sam Isaacson @.***> wrote:

I suggest looking through the first three Catalyst tutorials starting with https://catalyst.sciml.ai/stable/tutorials/using_catalyst/. This should show you how to specify reactions in Catalyst, and hopefully make it clearer how to covert over your current input files.

— Reply to this email directly, view it on GitHub https://github.com/SciML/ReactionNetworkImporters.jl/issues/81#issuecomment-1228926525, or unsubscribe https://github.com/notifications/unsubscribe-auth/A2YBYUIJN7QH745EEXQN3XLV3ETCPANCNFSM57X2IRAQ . You are receiving this because you authored the thread.Message ID: @.***>

feeburn1 commented 2 years ago

Sam, Can you recommend someone who knows the input routines that I could hire to help with this?

Thanks, Hep

On Fri, Aug 26, 2022 at 2:35 PM Sam Isaacson @.***> wrote:

I suggest looking through the first three Catalyst tutorials starting with https://catalyst.sciml.ai/stable/tutorials/using_catalyst/. This should show you how to specify reactions in Catalyst, and hopefully make it clearer how to covert over your current input files.

— Reply to this email directly, view it on GitHub https://github.com/SciML/ReactionNetworkImporters.jl/issues/81#issuecomment-1228926525, or unsubscribe https://github.com/notifications/unsubscribe-auth/A2YBYUIJN7QH745EEXQN3XLV3ETCPANCNFSM57X2IRAQ . You are receiving this because you authored the thread.Message ID: @.***>

isaacsas commented 2 years ago

Maybe @yewalenikhil65 would be interested?

yewalenikhil65 commented 2 years ago

I would love to take a shot at this, but i am pretty much tied up till atleast september 15th. Wild idea, can we parse the reactions as strings from those text file into julia syntax or catalyst syntax straightway ? I guess its not much far from Catalyst syntax

feeburn1 commented 2 years ago

No hurry, we can wait till you're ready to take this on.

Let me get the full set of files that describe the system, including phys props of each species.

Best, Hep

On Wed, Aug 31, 2022 at 9:19 AM Nikhil Yewale @.***> wrote:

I would love to take a shot at this, but i am pretty much tied up till atleast september 15th. Wild idea, can we parse the reactions as strings from those text file into julia syntax or catalyst syntax straightway ? I guess its not much far from Catalyst syntax

— Reply to this email directly, view it on GitHub https://github.com/SciML/ReactionNetworkImporters.jl/issues/81#issuecomment-1233078297, or unsubscribe https://github.com/notifications/unsubscribe-auth/A2YBYUNLIBHU63NG2UY43QDV35ZWZANCNFSM57X2IRAQ . You are receiving this because you authored the thread.Message ID: @.***>

feeburn1 commented 2 years ago

Nikhil Here are the files describing the stoichiometry, rxn network, phys props for getting Kea and set of dy/dt . Thanks

PS the reactor geometry is 4 reactors in series, with inter reactor heating, axial flow outward to a center pipe. dimensions are

On Wed, Aug 31, 2022 at 12:49 PM Fee Burn @.***> wrote:

No hurry, we can wait till you're ready to take this on.

Let me get the full set of files that describe the system, including phys props of each species.

Best, Hep

On Wed, Aug 31, 2022 at 9:19 AM Nikhil Yewale @.***> wrote:

I would love to take a shot at this, but i am pretty much tied up till atleast september 15th. Wild idea, can we parse the reactions as strings from those text file into julia syntax or catalyst syntax straightway ? I guess its not much far from Catalyst syntax

— Reply to this email directly, view it on GitHub https://github.com/SciML/ReactionNetworkImporters.jl/issues/81#issuecomment-1233078297, or unsubscribe https://github.com/notifications/unsubscribe-auth/A2YBYUNLIBHU63NG2UY43QDV35ZWZANCNFSM57X2IRAQ . You are receiving this because you authored the thread.Message ID: @.***>

RxnFamID RxnFamName lgA E0 alpha
RF1 Aromatization 9.721327 4.910253 0.3064728
RF2 HDPParaffinCracking 13.11263 53.84538 0.2906232
RF3 HydroDealkylation 13.92782 81.48063 0.2418331
RF4 Hydrogenolysis 9.103456 77.93676 0.297252
RF5 ParaffinCyclization5 15.89793 57.51656 0.270469
RF6 ParaffinCyclization6 15.89793 57.51656 0.270469
RF7 ParaffinIsomerization 7.225972 23.76506 0.2167755
RF8 RingIsomerization 14.66349 27.60616 0.2322453

dydt[Species000011] = 0 + Rxn1 + Rxn632 + Rxn659 + Rxn661 + Rxn666 + Rxn669 + Rxn672 + Rxn710 + Rxn714 dydt[Species000012] = 0 - Rxn1 + Rxn631 + Rxn653 + Rxn654 + Rxn665 + Rxn668 + Rxn671 + Rxn712 + Rxn714 + Rxn871 - Rxn1197 dydt[Species000015] = 0 - Rxn2 dydt[Species000019] = 0 + Rxn558 + Rxn563 + Rxn571 + Rxn581 + Rxn588 + Rxn592 dydt[Species000020] = 0 + Rxn50 + Rxn54 + Rxn90 + Rxn95 + Rxn156 + Rxn161 + Rxn183 + Rxn206 + Rxn251 + Rxn313 + Rxn320 + Rxn326 + Rxn334 + Rxn338 + 2Rxn352 + Rxn355 + Rxn370 + Rxn377 + Rxn384 + Rxn405 + Rxn415 + Rxn434 + Rxn441 + 2Rxn447 + Rxn486 + Rxn518 + Rxn525 + 2Rxn533 + Rxn539 + Rxn554 + Rxn562 + Rxn571 + Rxn599 + Rxn605 + Rxn610 + Rxn618 + Rxn667 + Rxn671 + Rxn672 + Rxn677 + Rxn683 + Rxn690 + Rxn710 + Rxn712 - Rxn715 - Rxn716 - Rxn717 + Rxn726 + Rxn729 + Rxn732 - Rxn735 - Rxn871 - Rxn939 - Rxn940 dydt[Species000022] = 0 + Rxn31 + Rxn32 + Rxn34 + Rxn35 + Rxn38 + Rxn39 + Rxn41 + Rxn42 + Rxn43 + Rxn45 + Rxn46 + Rxn50 + Rxn52 + Rxn54 + Rxn56 + Rxn58 + Rxn60 + Rxn62 + Rxn65 + Rxn66 + Rxn68 + Rxn69 + Rxn72 + Rxn73 + Rxn74 + Rxn75 + Rxn77 + Rxn81 + Rxn83 + Rxn85 + Rxn87 + Rxn91 + Rxn92 + Rxn94 + Rxn97 + Rxn99 + Rxn102 + Rxn105 + Rxn107 + Rxn110 + Rxn112 + Rxn113 + Rxn115 + Rxn117 + Rxn119 + Rxn121 + Rxn123 + Rxn125 + Rxn128 + Rxn129 + Rxn131 + Rxn133 + Rxn135 + Rxn136 + Rxn139 + Rxn140 + Rxn143 + Rxn144 + Rxn145 + Rxn147 + Rxn148 + Rxn151 + Rxn152 + Rxn153 + Rxn157 + Rxn160 + Rxn162 + Rxn165 + Rxn168 + Rxn172 + Rxn173 + Rxn176 + Rxn180 + Rxn182 + Rxn186 + Rxn187 + Rxn190 + Rxn191 + Rxn193 + Rxn197 + Rxn199 + Rxn202 + Rxn203 + Rxn207 + Rxn208 + Rxn210 + Rxn214 + Rxn215 + Rxn217 + Rxn220 + Rxn222 + Rxn223 + Rxn225 + Rxn228 + Rxn230 + Rxn231 + Rxn234 + Rxn236 + Rxn240 + Rxn242 + Rxn243 + Rxn246 + Rxn248 + Rxn250 + Rxn254 + Rxn255 + Rxn257 + Rxn259 + Rxn261 + Rxn263 + Rxn266 + Rxn268 + Rxn271 + Rxn273 + Rxn274 + Rxn276 + Rxn278 + Rxn280 + Rxn282 + Rxn284 + Rxn286 + Rxn288 + Rxn290 + Rxn292 + Rxn293 + Rxn296 + Rxn298 + Rxn299 + Rxn301 + Rxn303 + Rxn305 + Rxn307 + Rxn309 + Rxn311 + Rxn312 + Rxn317 + Rxn322 + Rxn325 + Rxn327 + Rxn330 + Rxn333 + Rxn372 + Rxn373 + Rxn376 + Rxn393 + Rxn394 + Rxn397 + Rxn401 + Rxn402 + Rxn428 + Rxn430 + Rxn433 + Rxn456 + Rxn457 + Rxn460 + Rxn464 + Rxn465 + Rxn467 + Rxn468 + Rxn503 + Rxn506 + Rxn510 + Rxn511 + Rxn513 + Rxn515 + Rxn546 + Rxn549 + Rxn550 + Rxn561 + Rxn583 + Rxn603 + Rxn620 + Rxn621 + Rxn624 + Rxn717 + 2Rxn718 + Rxn719 + Rxn720 + Rxn723 + Rxn726 + Rxn730 + Rxn734 dydt[Species000023] = 0 + 3Rxn1 + 3Rxn2 + 3Rxn3 + 3Rxn4 + 3Rxn5 + 3Rxn6 + 3Rxn7 + 3Rxn8 + 3Rxn9 + 3Rxn10 + 3Rxn11 + 3Rxn12 + 3Rxn13 + 3Rxn14 + 3Rxn15 + 3Rxn16 + 3Rxn17 + 3Rxn18 + 3Rxn19 + 3Rxn20 + 3Rxn21 + 3Rxn22 + 3Rxn23 + 3Rxn24 + 3Rxn25 + 3Rxn26 + 3Rxn27 + 3Rxn28 + 3Rxn29 + 3Rxn30 - Rxn31 - Rxn32 - Rxn33 - Rxn34 - Rxn35 - Rxn36 - Rxn37 - Rxn38 - Rxn39 - Rxn40 - Rxn41 - Rxn42 - Rxn43 - Rxn44 - Rxn45 - Rxn46 - Rxn47 - Rxn48 - Rxn49 - Rxn50 - Rxn51 - Rxn52 - Rxn53 - Rxn54 - Rxn55 - Rxn56 - Rxn57 - Rxn58 - Rxn59 - Rxn60 - Rxn61 - Rxn62 - Rxn63 - Rxn64 - Rxn65 - Rxn66 - Rxn67 - Rxn68 - Rxn69 - Rxn70 - Rxn71 - Rxn72 - Rxn73 - Rxn74 - Rxn75 - Rxn76 - Rxn77 - Rxn78 - Rxn79 - Rxn80 - Rxn81 - Rxn82 - Rxn83 - Rxn84 - Rxn85 - Rxn86 - Rxn87 - Rxn88 - Rxn89 - Rxn90 - Rxn91 - Rxn92 - Rxn93 - Rxn94 - Rxn95 - Rxn96 - Rxn97 - Rxn98 - Rxn99 - Rxn100 - Rxn101 - Rxn102 - Rxn103 - Rxn104 - Rxn105 - Rxn106 - Rxn107 - Rxn108 - Rxn109 - Rxn110 - Rxn111 - Rxn112 - Rxn113 - Rxn114 - Rxn115 - Rxn116 - Rxn117 - Rxn118 - Rxn119 - Rxn120 - Rxn121 - Rxn122 - Rxn123 - Rxn124 - Rxn125 - Rxn126 - Rxn127 - Rxn128 - Rxn129 - Rxn130 - Rxn131 - Rxn132 - Rxn133 - Rxn134 - Rxn135 - Rxn136 - Rxn137 - Rxn138 - Rxn139 - Rxn140 - Rxn141 - Rxn142 - Rxn143 - Rxn144 - Rxn145 - Rxn146 - Rxn147 - Rxn148 - Rxn149 - Rxn150 - Rxn151 - Rxn152 - Rxn153 - Rxn154 - Rxn155 - Rxn156 - Rxn157 - Rxn158 - Rxn159 - Rxn160 - Rxn161 - Rxn162 - Rxn163 - Rxn164 - Rxn165 - Rxn166 - Rxn167 - Rxn168 - Rxn169 - Rxn170 - Rxn171 - Rxn172 - Rxn173 - Rxn174 - Rxn175 - Rxn176 - Rxn177 - Rxn178 - Rxn179 - Rxn180 - Rxn181 - Rxn182 - Rxn183 - Rxn184 - Rxn185 - Rxn186 - Rxn187 - Rxn188 - Rxn189 - Rxn190 - Rxn191 - Rxn192 - Rxn193 - Rxn194 - Rxn195 - Rxn196 - Rxn197 - Rxn198 - Rxn199 - Rxn200 - Rxn201 - Rxn202 - Rxn203 - Rxn204 - Rxn205 - Rxn206 - Rxn207 - Rxn208 - Rxn209 - Rxn210 - Rxn211 - Rxn212 - Rxn213 - Rxn214 - Rxn215 - Rxn216 - Rxn217 - Rxn218 - Rxn219 - Rxn220 - Rxn221 - Rxn222 - Rxn223 - Rxn224 - Rxn225 - Rxn226 - Rxn227 - Rxn228 - Rxn229 - Rxn230 - Rxn231 - Rxn232 - Rxn233 - Rxn234 - Rxn235 - Rxn236 - Rxn237 - Rxn238 - Rxn239 - Rxn240 - Rxn241 - Rxn242 - Rxn243 - Rxn244 - Rxn245 - Rxn246 - Rxn247 - Rxn248 - Rxn249 - Rxn250 - Rxn251 - Rxn252 - Rxn253 - Rxn254 - Rxn255 - Rxn256 - Rxn257 - Rxn258 - Rxn259 - Rxn260 - Rxn261 - Rxn262 - Rxn263 - Rxn264 - Rxn265 - Rxn266 - Rxn267 - Rxn268 - Rxn269 - Rxn270 - Rxn271 - Rxn272 - Rxn273 - Rxn274 - Rxn275 - Rxn276 - Rxn277 - Rxn278 - Rxn279 - Rxn280 - Rxn281 - Rxn282 - Rxn283 - Rxn284 - Rxn285 - Rxn286 - Rxn287 - Rxn288 - Rxn289 - Rxn290 - Rxn291 - Rxn292 - Rxn293 - Rxn294 - Rxn295 - Rxn296 - Rxn297 - Rxn298 - Rxn299 - Rxn300 - Rxn301 - Rxn302 - Rxn303 - Rxn304 - Rxn305 - Rxn306 - Rxn307 - Rxn308 - Rxn309 - Rxn310 - Rxn311 - Rxn312 - Rxn313 - Rxn314 - Rxn315 - Rxn316 - Rxn317 - Rxn318 - Rxn319 - Rxn320 - Rxn321 - Rxn322 - Rxn323 - Rxn324 - Rxn325 - Rxn326 - Rxn327 - Rxn328 - Rxn329 - Rxn330 - Rxn331 - Rxn332 - Rxn333 - Rxn334 - Rxn335 - Rxn336 - Rxn337 - Rxn338 - Rxn339 - Rxn340 - Rxn341 - Rxn342 - Rxn343 - Rxn344 - Rxn345 - Rxn346 - Rxn347 - Rxn348 - Rxn349 - Rxn350 - Rxn351 - Rxn352 - Rxn353 - Rxn354 - Rxn355 - Rxn356 - Rxn357 - Rxn358 - Rxn359 - Rxn360 - Rxn361 - Rxn362 - Rxn363 - Rxn364 - Rxn365 - Rxn366 - Rxn367 - Rxn368 - Rxn369 - Rxn370 - Rxn371 - Rxn372 - Rxn373 - Rxn374 - Rxn375 - Rxn376 - Rxn377 - Rxn378 - Rxn379 - Rxn380 - Rxn381 - Rxn382 - Rxn383 - Rxn384 - Rxn385 - Rxn386 - Rxn387 - Rxn388 - Rxn389 - Rxn390 - Rxn391 - Rxn392 - Rxn393 - Rxn394 - Rxn395 - Rxn396 - Rxn397 - Rxn398 - Rxn399 - Rxn400 - Rxn401 - Rxn402 - Rxn403 - Rxn404 - Rxn405 - Rxn406 - Rxn407 - Rxn408 - Rxn409 - Rxn410 - Rxn411 - Rxn412 - Rxn413 - Rxn414 - Rxn415 - Rxn416 - Rxn417 - Rxn418 - Rxn419 - Rxn420 - Rxn421 - Rxn422 - Rxn423 - Rxn424 - Rxn425 - Rxn426 - Rxn427 - Rxn428 - Rxn429 - Rxn430 - Rxn431 - Rxn432 - Rxn433 - Rxn434 - Rxn435 - Rxn436 - Rxn437 - Rxn438 - Rxn439 - Rxn440 - Rxn441 - Rxn442 - Rxn443 - Rxn444 - Rxn445 - Rxn446 - Rxn447 - Rxn448 - Rxn449 - Rxn450 - Rxn451 - Rxn452 - Rxn453 - Rxn454 - Rxn455 - Rxn456 - Rxn457 - Rxn458 - Rxn459 - Rxn460 - Rxn461 - Rxn462 - Rxn463 - Rxn464 - Rxn465 - Rxn466 - Rxn467 - Rxn468 - Rxn469 - Rxn470 - Rxn471 - Rxn472 - Rxn473 - Rxn474 - Rxn475 - Rxn476 - Rxn477 - Rxn478 - Rxn479 - Rxn480 - Rxn481 - Rxn482 - Rxn483 - Rxn484 - Rxn485 - Rxn486 - Rxn487 - Rxn488 - Rxn489 - Rxn490 - Rxn491 - Rxn492 - Rxn493 - Rxn494 - Rxn495 - Rxn496 - Rxn497 - Rxn498 - Rxn499 - Rxn500 - Rxn501 - Rxn502 - Rxn503 - Rxn504 - Rxn505 - Rxn506 - Rxn507 - Rxn508 - Rxn509 - Rxn510 - Rxn511 - Rxn512 - Rxn513 - Rxn514 - Rxn515 - Rxn516 - Rxn517 - Rxn518 - Rxn519 - Rxn520 - Rxn521 - Rxn522 - Rxn523 - Rxn524 - Rxn525 - Rxn526 - Rxn527 - Rxn528 - Rxn529 - Rxn530 - Rxn531 - Rxn532 - Rxn533 - Rxn534 - Rxn535 - Rxn536 - Rxn537 - Rxn538 - Rxn539 - Rxn540 - Rxn541 - Rxn542 - Rxn543 - Rxn544 - Rxn545 - Rxn546 - Rxn547 - Rxn548 - Rxn549 - Rxn550 - Rxn551 - Rxn552 - Rxn553 - Rxn554 - Rxn555 - Rxn556 - Rxn557 - Rxn558 - Rxn559 - Rxn560 - Rxn561 - Rxn562 - Rxn563 - Rxn564 - Rxn565 - Rxn566 - Rxn567 - Rxn568 - Rxn569 - Rxn570 - Rxn571 - Rxn572 - Rxn573 - Rxn574 - Rxn575 - Rxn576 - Rxn577 - Rxn578 - Rxn579 - Rxn580 - Rxn581 - Rxn582 - Rxn583 - Rxn584 - Rxn585 - Rxn586 - Rxn587 - Rxn588 - Rxn589 - Rxn590 - Rxn591 - Rxn592 - Rxn593 - Rxn594 - Rxn595 - Rxn596 - Rxn597 - Rxn598 - Rxn599 - Rxn600 - Rxn601 - Rxn602 - Rxn603 - Rxn604 - Rxn605 - Rxn606 - Rxn607 - Rxn608 - Rxn609 - Rxn610 - Rxn611 - Rxn612 - Rxn613 - Rxn614 - Rxn615 - Rxn616 - Rxn617 - Rxn618 - Rxn619 - Rxn620 - Rxn621 - Rxn622 - Rxn623 - Rxn624 - Rxn625 - Rxn626 - Rxn627 - Rxn628 - Rxn629 - Rxn630 - Rxn631 - Rxn632 - Rxn633 - Rxn634 - Rxn635 - Rxn636 - Rxn637 - Rxn638 - Rxn639 - Rxn640 - Rxn641 - Rxn642 - Rxn643 - Rxn644 - Rxn645 - Rxn646 - Rxn647 - Rxn648 - Rxn649 - Rxn650 - Rxn651 - Rxn652 - Rxn653 - Rxn654 - Rxn655 - Rxn656 - Rxn657 - Rxn658 - Rxn659 - Rxn660 - Rxn661 - Rxn662 - Rxn663 - Rxn664 - Rxn665 - Rxn666 - Rxn667 - Rxn668 - Rxn669 - Rxn670 - Rxn671 - Rxn672 - Rxn673 - Rxn674 - Rxn675 - Rxn676 - Rxn677 - Rxn678 - Rxn679 - Rxn680 - Rxn681 - Rxn682 - Rxn683 - Rxn684 - Rxn685 - Rxn686 - Rxn687 - Rxn688 - Rxn689 - Rxn690 - Rxn691 - Rxn692 - Rxn693 - Rxn694 - Rxn695 - Rxn696 - Rxn697 - Rxn698 - Rxn699 - Rxn700 - Rxn701 - Rxn702 - Rxn703 - Rxn704 - Rxn705 - Rxn706 - Rxn707 - Rxn708 - Rxn709 - Rxn710 - Rxn711 - Rxn712 - Rxn713 - Rxn714 - Rxn715 - Rxn716 - Rxn717 - Rxn718 - Rxn719 - Rxn720 - Rxn721 - Rxn722 - Rxn723 - Rxn724 - Rxn725 - Rxn726 - Rxn727 - Rxn728 - Rxn729 - Rxn730 - Rxn731 - Rxn732 - Rxn733 - Rxn734 + Rxn735 + Rxn736 + Rxn737 + Rxn738 + Rxn739 + Rxn740 + Rxn741 + Rxn742 + Rxn743 + Rxn744 + Rxn745 + Rxn746 + Rxn747 + Rxn748 + Rxn749 + Rxn750 + Rxn751 + Rxn752 + Rxn753 + Rxn754 + Rxn755 + Rxn756 + Rxn757 + Rxn758 + Rxn759 + Rxn760 + Rxn761 + Rxn762 + Rxn763 + Rxn764 + Rxn765 + Rxn766 + Rxn767 + Rxn768 + Rxn769 + Rxn770 + Rxn771 + Rxn772 + Rxn773 + Rxn774 + Rxn775 + Rxn776 + Rxn777 + Rxn778 + Rxn779 + Rxn780 + Rxn781 + Rxn782 + Rxn783 + Rxn784 + Rxn785 + Rxn786 + Rxn787 + Rxn788 + Rxn789 + Rxn790 + Rxn791 + Rxn792 + Rxn793 + Rxn794 + Rxn795 + Rxn796 + Rxn797 + Rxn798 + Rxn799 + Rxn800 + Rxn801 + Rxn802 + Rxn803 + Rxn804 + Rxn805 + Rxn806 + Rxn807 + Rxn808 + Rxn809 + Rxn810 + Rxn811 + Rxn812 + Rxn813 + Rxn814 + Rxn815 + Rxn816 + Rxn817 + Rxn818 + Rxn819 + Rxn820 + Rxn821 + Rxn822 + Rxn823 + Rxn824 + Rxn825 + Rxn826 + Rxn827 + Rxn828 + Rxn829 + Rxn830 + Rxn831 + Rxn832 + Rxn833 + Rxn834 + Rxn835 + Rxn836 + Rxn837 + Rxn838 + Rxn839 + Rxn840 + Rxn841 + Rxn842 + Rxn843 + Rxn844 + Rxn845 + Rxn846 + Rxn847 + Rxn848 + Rxn849 + Rxn850 + Rxn851 + Rxn852 + Rxn853 + Rxn854 + Rxn855 + Rxn856 + Rxn857 + Rxn858 + Rxn859 + Rxn860 + Rxn861 + Rxn862 + Rxn863 + Rxn864 + Rxn865 + Rxn866 + Rxn867 + Rxn868 + Rxn869 + Rxn870 + Rxn871 + Rxn872 + Rxn873 + Rxn874 + Rxn875 + Rxn876 + Rxn877 + Rxn878 + Rxn879 + Rxn880 + Rxn881 + Rxn882 + Rxn883 + Rxn884 + Rxn885 + Rxn886 + Rxn887 + Rxn888 + Rxn889 + Rxn890 + Rxn891 + Rxn892 + Rxn893 + Rxn894 + Rxn895 + Rxn896 + Rxn897 + Rxn898 + Rxn899 + Rxn900 + Rxn901 + Rxn902 + Rxn903 + Rxn904 + Rxn905 + Rxn906 + Rxn907 + Rxn908 + Rxn909 + Rxn910 + Rxn911 + Rxn912 + Rxn913 + Rxn914 + Rxn915 + Rxn916 + Rxn917 + Rxn918 + Rxn919 + Rxn920 + Rxn921 + Rxn922 + Rxn923 + Rxn924 + Rxn925 + Rxn926 + Rxn927 + Rxn928 + Rxn929 + Rxn930 + Rxn931 + Rxn932 + Rxn933 + Rxn934 + Rxn935 + Rxn936 + Rxn937 + Rxn938 dydt[Species000024] = 0 + Rxn33 + Rxn37 + Rxn40 + Rxn44 + Rxn51 + Rxn53 + Rxn57 + Rxn59 + Rxn64 + Rxn67 + Rxn71 + Rxn82 + Rxn86 + Rxn90 + Rxn93 + Rxn95 + Rxn98 + Rxn106 + Rxn111 + Rxn114 + Rxn118 + Rxn124 + Rxn127 + Rxn130 + Rxn134 + Rxn142 + Rxn150 + Rxn159 + Rxn164 + Rxn167 + Rxn171 + Rxn175 + Rxn179 + Rxn181 + Rxn184 + Rxn185 + Rxn192 + Rxn198 + Rxn201 + Rxn209 + Rxn213 + Rxn216 + Rxn221 + Rxn224 + Rxn226 + Rxn229 + Rxn235 + Rxn241 + Rxn249 + Rxn252 + Rxn256 + Rxn258 + Rxn262 + Rxn272 + Rxn285 + Rxn291 + Rxn297 + Rxn304 + Rxn306 + Rxn310 + Rxn316 + Rxn324 + Rxn332 + Rxn337 + Rxn344 + Rxn350 + Rxn371 + Rxn375 + Rxn380 + Rxn383 + Rxn392 + Rxn396 + Rxn400 + Rxn406 + Rxn408 + Rxn412 + Rxn414 + Rxn429 + Rxn432 + Rxn437 + Rxn440 + Rxn459 + Rxn463 + Rxn466 + Rxn471 + Rxn473 + Rxn476 + Rxn478 + Rxn481 + Rxn483 + Rxn502 + Rxn505 + Rxn509 + Rxn514 + Rxn519 + Rxn521 + Rxn524 + Rxn548 + Rxn553 + Rxn560 + Rxn569 + Rxn602 + Rxn608 + Rxn617 + Rxn619 + Rxn623 + Rxn625 + Rxn627 + Rxn629 + Rxn630 + Rxn631 + Rxn632 + Rxn637 + Rxn638 + Rxn641 + Rxn644 + Rxn646 + Rxn647 + Rxn649 + Rxn650 + Rxn651 + Rxn652 + Rxn655 + Rxn656 + Rxn657 + Rxn658 + Rxn660 + Rxn662 + Rxn663 + Rxn673 + Rxn679 + Rxn686 + Rxn692 + Rxn694 + Rxn697 + Rxn702 + Rxn705 + Rxn708 + Rxn715 - Rxn718 + Rxn719 + 2Rxn721 + Rxn722 + Rxn725 + Rxn729 + Rxn733 dydt[Species000025] = 0 + Rxn31 + Rxn33 + 2Rxn36 + 2Rxn47 + Rxn48 + Rxn49 + Rxn55 + Rxn61 + Rxn63 + Rxn70 + Rxn76 + Rxn79 + Rxn80 + Rxn84 + Rxn89 + Rxn96 + Rxn100 + Rxn104 + Rxn108 + Rxn116 + Rxn120 + Rxn122 + Rxn126 + Rxn138 + Rxn146 + Rxn149 + Rxn156 + Rxn158 + Rxn161 + Rxn166 + Rxn174 + Rxn178 + Rxn183 + Rxn189 + Rxn195 + Rxn205 + Rxn206 + Rxn212 + Rxn219 + Rxn232 + Rxn239 + Rxn245 + Rxn247 + Rxn251 + Rxn253 + Rxn260 + Rxn267 + Rxn269 + Rxn275 + Rxn279 + Rxn283 + Rxn287 + Rxn300 + Rxn302 + Rxn315 + Rxn321 + Rxn323 + Rxn329 + Rxn331 + Rxn336 + Rxn341 + Rxn343 + Rxn348 + Rxn354 + Rxn359 + Rxn361 + Rxn365 + Rxn367 + Rxn374 + Rxn382 + Rxn389 + Rxn395 + Rxn407 + Rxn413 + Rxn419 + Rxn424 + Rxn427 + Rxn431 + Rxn436 + Rxn439 + Rxn444 + Rxn446 + Rxn450 + Rxn452 + Rxn455 + Rxn458 + Rxn477 + Rxn487 + Rxn491 + Rxn495 + Rxn499 + Rxn504 + Rxn512 + Rxn520 + Rxn523 + Rxn527 + Rxn529 + Rxn532 + Rxn535 + Rxn537 + Rxn540 + Rxn542 + Rxn545 + Rxn559 + Rxn568 + Rxn576 + Rxn582 + Rxn590 + Rxn597 + Rxn601 + Rxn607 + Rxn614 + Rxn616 + Rxn622 + Rxn626 + Rxn628 + Rxn635 + Rxn639 + Rxn640 + Rxn643 + Rxn645 + Rxn648 + Rxn653 + Rxn654 + Rxn659 + Rxn661 + Rxn674 + Rxn680 + Rxn687 + Rxn693 + Rxn696 + Rxn698 + Rxn699 + Rxn703 + Rxn706 + 2Rxn716 - Rxn719 + Rxn720 + Rxn722 + Rxn724 + Rxn727 + Rxn732 dydt[Species000026] = 0 + Rxn32 + Rxn40 + Rxn48 + Rxn55 + Rxn70 + Rxn78 + 2Rxn88 + Rxn103 + Rxn109 + 2Rxn132 + Rxn141 + Rxn155 + Rxn163 + Rxn169 + Rxn170 + Rxn177 + Rxn194 + Rxn200 + Rxn204 + Rxn211 + Rxn218 + Rxn227 + Rxn238 + Rxn289 + Rxn295 + Rxn308 + Rxn313 + Rxn319 + Rxn328 + Rxn335 + Rxn342 + Rxn349 + Rxn353 + Rxn360 + Rxn369 + Rxn370 + Rxn379 + Rxn381 + Rxn387 + Rxn388 + Rxn391 + Rxn398 + Rxn404 + Rxn411 + Rxn417 + Rxn418 + Rxn422 + Rxn426 + Rxn438 + Rxn445 + Rxn449 + Rxn451 + Rxn454 + Rxn462 + Rxn472 + Rxn482 + Rxn485 + Rxn490 + Rxn498 + Rxn501 + Rxn507 + Rxn517 + Rxn528 + Rxn536 + Rxn541 + Rxn547 + Rxn552 + Rxn558 + Rxn567 + Rxn575 + Rxn600 + Rxn606 + Rxn613 + Rxn618 + Rxn633 + Rxn636 + Rxn665 + Rxn666 + Rxn675 + Rxn681 + Rxn688 + Rxn695 + Rxn700 + Rxn701 + Rxn704 + Rxn707 + Rxn709 + Rxn711 + Rxn713 + Rxn715 - Rxn720 - Rxn721 + Rxn723 + Rxn724 + 2Rxn728 + Rxn731 - Rxn941 dydt[Species000027] = 0 - Rxn31 + Rxn34 + Rxn35 + Rxn37 + Rxn44 + Rxn49 + Rxn61 + Rxn63 + Rxn76 + Rxn78 + 2Rxn101 + Rxn103 + Rxn109 + 2Rxn137 + Rxn141 + Rxn154 + Rxn188 + Rxn196 + Rxn233 + Rxn237 + Rxn244 + Rxn264 + Rxn265 + Rxn270 + Rxn277 + Rxn281 + Rxn294 + Rxn320 + Rxn326 + Rxn340 + Rxn347 + Rxn358 + Rxn364 + Rxn543 + Rxn581 + Rxn589 + Rxn596 + Rxn634 + Rxn642 + Rxn941 dydt[Species000028] = 0 + Rxn38 + Rxn41 + Rxn53 + Rxn59 + Rxn80 + Rxn84 + Rxn96 + Rxn120 + Rxn126 + Rxn154 + Rxn163 + Rxn169 + Rxn177 + Rxn188 + Rxn196 + Rxn218 + Rxn227 + Rxn233 + Rxn281 + 2Rxn314 + Rxn318 + Rxn334 + Rxn339 + Rxn351 + Rxn356 + Rxn366 + Rxn368 + Rxn378 + Rxn385 + Rxn390 + Rxn403 + Rxn410 + Rxn416 + Rxn423 + 2Rxn425 + Rxn434 + Rxn435 + Rxn442 + Rxn443 + Rxn448 + Rxn453 + Rxn475 + Rxn479 + Rxn484 + Rxn489 + Rxn493 + 2Rxn500 + Rxn508 + Rxn516 + Rxn518 + Rxn522 + Rxn526 + Rxn530 + Rxn534 + Rxn538 + Rxn555 + Rxn563 + Rxn574 + Rxn598 + Rxn604 + Rxn612 + Rxn664 + Rxn668 + Rxn669 + Rxn676 + Rxn682 + Rxn689 + Rxn717 - Rxn722 - Rxn723 + Rxn725 + Rxn727 + Rxn731 - Rxn736 - Rxn942 dydt[Species000029] = 0 - Rxn32 - Rxn33 - Rxn34 + Rxn39 + Rxn42 + Rxn43 + Rxn46 + Rxn51 + Rxn57 + Rxn67 + Rxn71 + Rxn79 + Rxn89 + Rxn100 + Rxn108 + Rxn116 + Rxn122 + Rxn146 + Rxn149 + Rxn155 + Rxn170 + Rxn200 + Rxn204 + Rxn211 + Rxn237 + Rxn238 + Rxn244 + Rxn264 + Rxn270 + Rxn277 + Rxn289 + Rxn294 + Rxn308 + Rxn318 + Rxn338 + Rxn345 + Rxn346 + Rxn357 + Rxn362 + Rxn368 + Rxn377 + Rxn386 + Rxn390 + 2Rxn399 + Rxn405 + Rxn409 + Rxn420 + Rxn453 + 2Rxn461 + Rxn469 + Rxn470 + Rxn474 + Rxn480 + Rxn494 + Rxn496 + Rxn508 + 2Rxn544 + Rxn551 + Rxn578 + Rxn588 + Rxn595 + Rxn942 - Rxn943 dydt[Species000030] = 0 - Rxn35 + Rxn45 + Rxn64 + Rxn104 + Rxn138 + Rxn194 + Rxn265 + Rxn295 + Rxn943 dydt[Species000031] = 0 + Rxn625 + Rxn626 + Rxn628 + Rxn633 + Rxn634 + Rxn636 + Rxn642 + Rxn664 + Rxn667 + Rxn670 + Rxn736 dydt[Species000032] = 0 - Rxn36 - Rxn37 - Rxn38 - Rxn39 + Rxn52 + Rxn56 + Rxn62 + Rxn65 + Rxn72 + Rxn82 + Rxn86 + Rxn111 + Rxn114 + Rxn127 + Rxn158 + Rxn166 + Rxn189 + Rxn245 + Rxn247 + Rxn253 + Rxn275 + Rxn300 + Rxn319 + Rxn328 + Rxn339 + Rxn346 + Rxn355 + 2Rxn363 + Rxn409 + Rxn421 + Rxn426 + Rxn435 + Rxn441 + Rxn474 + Rxn488 + Rxn492 + Rxn497 + Rxn507 + Rxn522 + Rxn525 + 2*Rxn531 + Rxn539 + Rxn547 + Rxn577 + Rxn585 + Rxn592 - Rxn737 + Rxn939 - Rxn944 - Rxn945 - Rxn946 dydt[Species000033] = 0 - Rxn40 - Rxn41 - Rxn42 + Rxn58 + Rxn60 + Rxn68 + Rxn73 + Rxn93 + Rxn98 + Rxn130 + Rxn134 + Rxn174 + Rxn178 + Rxn219 + Rxn232 + Rxn239 + Rxn260 + Rxn287 + Rxn345 + Rxn369 + Rxn378 + Rxn384 + Rxn398 + Rxn410 + Rxn415 + Rxn421 + Rxn469 + Rxn479 + Rxn480 + Rxn486 + Rxn488 + Rxn497 + Rxn501 + Rxn516 + Rxn543 + Rxn551 - Rxn738 + Rxn940 + Rxn944 - Rxn947 dydt[Species000034] = 0 - Rxn43 - Rxn44 - Rxn45 + Rxn66 + Rxn69 + Rxn77 + Rxn106 + Rxn118 + Rxn142 + Rxn195 + Rxn212 + Rxn267 + Rxn269 + Rxn283 + Rxn391 + Rxn403 + Rxn462 + Rxn470 + Rxn475 + Rxn492 + Rxn946 + Rxn947 - Rxn948 dydt[Species000035] = 0 - Rxn46 - Rxn47 + Rxn74 + Rxn75 + Rxn124 + Rxn150 + Rxn205 + Rxn279 + Rxn302 + Rxn454 + Rxn945 + Rxn948 dydt[Species000036] = 0 + Rxn627 + Rxn629 + Rxn630 + Rxn635 + Rxn639 + Rxn640 + Rxn643 + Rxn645 + Rxn648 + Rxn735 + Rxn737 + Rxn738 + Rxn1197 dydt[Species000037] = 0 + Rxn81 + Rxn85 + Rxn91 + Rxn171 + Rxn179 + Rxn184 + Rxn315 + Rxn321 + Rxn335 + Rxn340 + Rxn351 + Rxn357 + Rxn379 + Rxn386 + Rxn427 + Rxn443 + Rxn455 + Rxn556 + Rxn564 + Rxn570 + Rxn609 + Rxn611 + Rxn616 + Rxn670 + Rxn678 + Rxn684 + Rxn691 - Rxn724 - Rxn725 - Rxn726 + Rxn730 + Rxn733 - Rxn739 - Rxn740 - Rxn872 - Rxn949 - Rxn950 dydt[Species000038] = 0 - Rxn48 - Rxn49 - Rxn50 - Rxn51 - Rxn52 + Rxn83 + Rxn92 + Rxn102 + Rxn105 + Rxn112 + Rxn121 + Rxn159 + Rxn164 + Rxn213 + Rxn235 + Rxn241 + Rxn252 + Rxn323 + Rxn329 + Rxn342 + Rxn349 + Rxn356 + Rxn366 + Rxn448 + Rxn538 + Rxn579 + Rxn584 + Rxn591 - Rxn741 - Rxn742 - Rxn873 + Rxn949 - Rxn951 - Rxn952 - Rxn953 - Rxn954 dydt[Species000039] = 0 - Rxn53 - Rxn54 - Rxn55 - Rxn56 - Rxn57 - Rxn58 + Rxn87 + Rxn94 + Rxn97 + Rxn110 + Rxn115 + Rxn123 + Rxn131 + Rxn167 + Rxn175 + Rxn185 + Rxn201 + Rxn221 + Rxn226 + Rxn258 + Rxn347 + Rxn362 + Rxn374 + Rxn381 + Rxn385 + Rxn411 + Rxn420 + Rxn423 + Rxn431 + Rxn438 + Rxn442 + Rxn494 + Rxn512 + Rxn530 + Rxn534 + Rxn545 + Rxn552 + Rxn622 - Rxn743 - Rxn744 - Rxn745 - Rxn874 + Rxn950 + Rxn951 - Rxn955 - Rxn956 - Rxn957 - Rxn958 dydt[Species000040] = 0 - Rxn59 - Rxn60 + Rxn99 + Rxn128 + Rxn135 + Rxn181 + Rxn229 + Rxn482 + Rxn504 + Rxn517 - Rxn746 + Rxn956 - Rxn959 dydt[Species000041] = 0 - Rxn61 - Rxn62 + Rxn113 + Rxn139 + Rxn147 + Rxn192 + Rxn272 + Rxn331 - Rxn747 + Rxn954 - Rxn960 - Rxn961 dydt[Species000042] = 0 - Rxn63 - Rxn64 - Rxn65 - Rxn66 + Rxn107 + Rxn117 + Rxn140 + Rxn143 + Rxn198 + Rxn249 + Rxn297 + Rxn496 + Rxn526 - Rxn748 + Rxn953 + Rxn955 - Rxn962 - Rxn963 dydt[Species000043] = 0 - Rxn67 - Rxn68 - Rxn69 + Rxn119 + Rxn136 + Rxn152 + Rxn216 + Rxn262 + Rxn310 + Rxn395 + Rxn404 + Rxn472 + Rxn484 + Rxn493 - Rxn749 + Rxn958 + Rxn959 - Rxn964 dydt[Species000044] = 0 - Rxn70 - Rxn71 - Rxn72 - Rxn73 - Rxn74 + Rxn125 + Rxn129 + Rxn133 + Rxn144 + Rxn148 + Rxn151 + Rxn209 + Rxn224 + Rxn256 + Rxn291 + Rxn306 + Rxn416 + Rxn458 + Rxn489 - Rxn750 + Rxn952 + Rxn957 + Rxn960 + Rxn962 + Rxn964 - Rxn965 dydt[Species000045] = 0 - Rxn75 - Rxn76 - Rxn77 + Rxn145 + Rxn153 + Rxn285 + Rxn304 + Rxn961 + Rxn963 + Rxn965 dydt[Species000046] = 0 - Rxn625 + Rxn637 + Rxn638 + Rxn641 + Rxn739 + Rxn745 + Rxn746 - Rxn1198 dydt[Species000047] = 0 + Rxn644 + Rxn650 + Rxn652 + Rxn741 + Rxn743 + Rxn747 - Rxn1199 dydt[Species000048] = 0 + Rxn646 + Rxn647 + Rxn742 + Rxn748 + Rxn749 - Rxn1200 dydt[Species000049] = 0 + Rxn649 + Rxn651 + Rxn740 + Rxn744 + Rxn750 - Rxn1201 dydt[Species000050] = 0 - Rxn3 + Rxn655 + Rxn656 + Rxn657 + Rxn658 + Rxn872 + Rxn873 + Rxn874 + Rxn1198 + Rxn1199 + Rxn1200 + Rxn1201 dydt[Species000051] = 0 + Rxn3 + Rxn660 + Rxn662 + Rxn663 + Rxn699 + Rxn701 dydt[Species000052] = 0 + Rxn157 + Rxn162 + Rxn172 + Rxn316 + Rxn336 + Rxn341 + Rxn353 + Rxn358 + Rxn371 + Rxn387 + Rxn417 + Rxn436 + Rxn449 + Rxn502 + Rxn557 + Rxn565 + Rxn572 + Rxn615 + Rxn617 + Rxn685 - Rxn727 - Rxn728 - Rxn729 - Rxn730 + Rxn734 - Rxn751 - Rxn752 - Rxn875 - Rxn876 - Rxn966 - Rxn967 - Rxn968 dydt[Species000053] = 0 - Rxn78 - Rxn79 - Rxn80 - Rxn81 - Rxn82 - Rxn83 + Rxn160 + Rxn173 + Rxn190 + Rxn197 + Rxn207 + Rxn242 + Rxn246 + Rxn324 + Rxn343 + Rxn360 + Rxn392 + Rxn429 + Rxn548 + Rxn580 + Rxn586 + Rxn593 - Rxn753 - Rxn754 - Rxn755 - Rxn877 - Rxn878 + Rxn966 - Rxn969 - Rxn970 - Rxn971 - Rxn972 - Rxn973 dydt[Species000054] = 0 - Rxn84 - Rxn85 - Rxn86 - Rxn87 + Rxn168 + Rxn187 + Rxn191 + Rxn222 + Rxn248 + Rxn364 + Rxn422 + Rxn432 + Rxn439 + Rxn445 + Rxn490 + Rxn509 + Rxn523 + Rxn541 - Rxn756 - Rxn757 - Rxn758 - Rxn879 + Rxn968 - Rxn974 - Rxn975 - Rxn976 - Rxn977 dydt[Species000055] = 0 - Rxn88 - Rxn89 - Rxn90 - Rxn91 - Rxn92 - Rxn93 - Rxn94 + Rxn165 + Rxn176 + Rxn180 + Rxn202 + Rxn208 + Rxn214 + Rxn220 + Rxn240 + Rxn348 + Rxn375 + Rxn382 + Rxn388 + Rxn400 + Rxn413 + Rxn451 + Rxn619 - Rxn759 - Rxn760 - Rxn761 - Rxn880 - Rxn881 - Rxn882 + Rxn967 + Rxn973 + Rxn977 - Rxn978 - Rxn979 - Rxn980 - Rxn981 - Rxn982 dydt[Species000056] = 0 - Rxn95 - Rxn96 - Rxn97 - Rxn98 - Rxn99 + Rxn182 + Rxn186 + Rxn230 + Rxn234 + Rxn254 + Rxn259 + Rxn505 + Rxn520 + Rxn536 + Rxn623 - Rxn762 - Rxn763 - Rxn764 - Rxn883 + Rxn976 + Rxn978 - Rxn983 - Rxn984 - Rxn985 dydt[Species000057] = 0 - Rxn100 - Rxn101 - Rxn102 + Rxn243 + Rxn266 + Rxn276 - Rxn765 - Rxn884 + Rxn972 - Rxn986 - Rxn987 - Rxn988 dydt[Species000058] = 0 - Rxn103 - Rxn104 - Rxn105 - Rxn106 - Rxn107 + Rxn199 + Rxn215 + Rxn268 + Rxn282 + Rxn298 - Rxn766 - Rxn885 + Rxn969 + Rxn982 - Rxn989 - Rxn990 - Rxn991 dydt[Species000059] = 0 - Rxn108 - Rxn109 - Rxn110 - Rxn111 - Rxn112 - Rxn113 + Rxn193 + Rxn203 + Rxn236 + Rxn273 + Rxn278 + Rxn288 + Rxn296 + Rxn332 + Rxn463 + Rxn514 - Rxn767 - Rxn768 - Rxn769 - Rxn886 + Rxn971 + Rxn981 + Rxn986 - Rxn992 - Rxn993 - Rxn994 - Rxn995 - Rxn996 - Rxn997 dydt[Species000060] = 0 - Rxn114 - Rxn115 - Rxn116 - Rxn117 - Rxn118 - Rxn119 + Rxn217 + Rxn250 + Rxn261 + Rxn271 + Rxn303 + Rxn311 + Rxn396 + Rxn407 + Rxn466 + Rxn477 + Rxn498 + Rxn528 - Rxn770 - Rxn771 - Rxn772 - Rxn887 + Rxn975 + Rxn980 + Rxn983 - Rxn998 - Rxn999 - Rxn1000 - Rxn1001 dydt[Species000061] = 0 - Rxn120 - Rxn121 - Rxn122 - Rxn123 - Rxn124 - Rxn125 + Rxn210 + Rxn223 + Rxn255 + Rxn280 + Rxn284 + Rxn292 + Rxn301 + Rxn459 - Rxn773 - Rxn774 - Rxn775 - Rxn888 + Rxn970 + Rxn974 + Rxn989 + Rxn996 + Rxn998 - Rxn1002 - Rxn1003 - Rxn1004 dydt[Species000062] = 0 - Rxn126 - Rxn127 - Rxn128 - Rxn129 + Rxn231 + Rxn257 - Rxn776 - Rxn777 + Rxn984 + Rxn995 + Rxn999 + Rxn1002 - Rxn1005 - Rxn1006 dydt[Species000063] = 0 - Rxn130 - Rxn131 - Rxn132 - Rxn133 + Rxn225 + Rxn228 + Rxn290 + Rxn307 + Rxn418 - Rxn778 - Rxn779 - Rxn889 + Rxn979 + Rxn992 + Rxn1000 - Rxn1007 - Rxn1008 dydt[Species000064] = 0 - Rxn134 - Rxn135 - Rxn136 + Rxn263 + Rxn485 - Rxn780 + Rxn985 + Rxn1005 + Rxn1008 dydt[Species000065] = 0 - Rxn137 - Rxn138 - Rxn139 - Rxn140 + Rxn274 + Rxn299 - Rxn781 + Rxn988 + Rxn991 + Rxn997 - Rxn1009 - Rxn1010 dydt[Species000066] = 0 - Rxn141 - Rxn142 - Rxn143 - Rxn144 - Rxn145 + Rxn286 + Rxn309 - Rxn782 + Rxn990 + Rxn994 + Rxn1007 + Rxn1010 - Rxn1011 dydt[Species000067] = 0 - Rxn146 - Rxn147 - Rxn148 + Rxn293 - Rxn783 + Rxn987 + Rxn1003 + Rxn1009 - Rxn1012 dydt[Species000068] = 0 - Rxn149 - Rxn150 - Rxn151 - Rxn152 - Rxn153 + Rxn305 + Rxn312 - Rxn784 + Rxn993 + Rxn1001 + Rxn1004 + Rxn1006 + Rxn1011 + Rxn1012 dydt[Species000069] = 0 - Rxn626 + Rxn751 + Rxn757 + Rxn762 - Rxn1202 dydt[Species000070] = 0 - Rxn627 + Rxn752 + Rxn756 + Rxn764 + Rxn776 + Rxn779 - Rxn1203 - Rxn1204 - Rxn1205 dydt[Species000071] = 0 - Rxn628 + Rxn755 + Rxn775 + Rxn777 - Rxn1206 dydt[Species000072] = 0 - Rxn629 + Rxn761 + Rxn772 + Rxn780 - Rxn1207 - Rxn1208 dydt[Species000073] = 0 - Rxn630 + Rxn753 + Rxn759 + Rxn763 + Rxn768 - Rxn1209 - Rxn1210 - Rxn1211 dydt[Species000074] = 0 + Rxn765 + Rxn766 + Rxn769 + Rxn770 + Rxn781 - Rxn1212 - Rxn1213 - Rxn1214 dydt[Species000075] = 0 + Rxn758 + Rxn767 + Rxn773 - Rxn1215 - Rxn1216 dydt[Species000076] = 0 + Rxn754 + Rxn771 + Rxn774 + Rxn782 + Rxn784 - Rxn1217 - Rxn1218 - Rxn1219 dydt[Species000077] = 0 + Rxn760 + Rxn778 + Rxn783 - Rxn1220 - Rxn1221 dydt[Species000078] = 0 - Rxn4 - Rxn631 + Rxn709 + Rxn713 + Rxn875 + Rxn882 + Rxn883 + Rxn1202 + Rxn1203 + Rxn1207 + Rxn1211 dydt[Species000079] = 0 - Rxn5 + Rxn880 + Rxn884 + Rxn1209 + Rxn1213 + Rxn1221 dydt[Species000080] = 0 - Rxn6 + Rxn877 + Rxn879 + Rxn886 + Rxn1204 + Rxn1210 + Rxn1212 + Rxn1215 + Rxn1218 dydt[Species000081] = 0 + Rxn878 + Rxn885 + Rxn887 + Rxn1206 + Rxn1214 + Rxn1219 dydt[Species000082] = 0 - Rxn7 + Rxn876 + Rxn881 + Rxn888 + Rxn889 + Rxn1205 + Rxn1208 + Rxn1216 + Rxn1217 + Rxn1220 dydt[Species000083] = 0 + Rxn4 - Rxn632 + Rxn692 + Rxn693 + Rxn695 + Rxn696 + Rxn700 + Rxn708 + Rxn711 dydt[Species000084] = 0 + Rxn5 dydt[Species000085] = 0 + Rxn6 dydt[Species000086] = 0 + Rxn7 dydt[Species000087] = 0 + Rxn317 + Rxn322 + Rxn337 + Rxn354 + Rxn359 + Rxn372 + Rxn380 + Rxn428 + Rxn444 + Rxn519 + Rxn535 + Rxn566 + Rxn573 - Rxn731 - Rxn732 - Rxn733 - Rxn734 - Rxn785 - Rxn786 - Rxn787 - Rxn890 - Rxn891 - Rxn1013 - Rxn1014 - Rxn1015 dydt[Species000088] = 0 - Rxn154 - Rxn155 - Rxn156 - Rxn157 - Rxn158 - Rxn159 - Rxn160 + Rxn325 + Rxn327 + Rxn344 + Rxn350 + Rxn361 + Rxn367 + Rxn373 + Rxn406 + Rxn437 + Rxn450 + Rxn456 + Rxn527 + Rxn549 + Rxn587 + Rxn594 - Rxn788 - Rxn789 - Rxn790 - Rxn791 - Rxn892 - Rxn893 - Rxn894 + Rxn1015 - Rxn1016 - Rxn1017 - Rxn1018 - Rxn1019 - Rxn1020 - Rxn1021 dydt[Species000089] = 0 - Rxn161 - Rxn162 - Rxn163 - Rxn164 - Rxn165 - Rxn166 - Rxn167 - Rxn168 + Rxn330 + Rxn365 + Rxn412 + Rxn433 + Rxn440 + Rxn446 + Rxn452 + Rxn510 + Rxn532 + Rxn540 + Rxn621 - Rxn792 - Rxn793 - Rxn794 - Rxn795 - Rxn796 - Rxn797 - Rxn895 - Rxn896 - Rxn897 - Rxn898 + Rxn1014 - Rxn1022 - Rxn1023 - Rxn1024 - Rxn1025 - Rxn1026 - Rxn1027 - Rxn1028 - Rxn1029 dydt[Species000090] = 0 - Rxn169 - Rxn170 - Rxn171 - Rxn172 - Rxn173 - Rxn174 - Rxn175 - Rxn176 + Rxn376 + Rxn383 + Rxn389 + Rxn393 + Rxn401 + Rxn424 + Rxn430 + Rxn457 + Rxn481 + Rxn503 + Rxn513 + Rxn546 + Rxn553 - Rxn798 - Rxn799 - Rxn800 - Rxn801 - Rxn802 - Rxn899 - Rxn900 - Rxn901 - Rxn902 + Rxn1013 + Rxn1020 + Rxn1024 - Rxn1030 - Rxn1031 - Rxn1032 - Rxn1033 - Rxn1034 - Rxn1035 dydt[Species000091] = 0 - Rxn177 - Rxn178 - Rxn179 - Rxn180 - Rxn181 - Rxn182 + Rxn483 + Rxn506 + Rxn521 + Rxn620 - Rxn803 - Rxn804 - Rxn805 - Rxn806 - Rxn903 - Rxn904 + Rxn1026 + Rxn1030 - Rxn1036 - Rxn1037 - Rxn1038 - Rxn1039 - Rxn1040 dydt[Species000092] = 0 - Rxn183 - Rxn184 - Rxn185 - Rxn186 - Rxn187 + Rxn537 + Rxn624 - Rxn807 - Rxn808 - Rxn809 - Rxn905 - Rxn906 + Rxn1025 + Rxn1036 - Rxn1041 - Rxn1042 - Rxn1043 dydt[Species000093] = 0 - Rxn188 - Rxn189 - Rxn190 - Rxn191 - Rxn192 - Rxn193 + Rxn333 + Rxn476 + Rxn511 + Rxn524 + Rxn542 - Rxn810 - Rxn811 - Rxn812 - Rxn813 - Rxn814 - Rxn907 - Rxn908 + Rxn1018 + Rxn1029 - Rxn1044 - Rxn1045 - Rxn1046 - Rxn1047 - Rxn1048 - Rxn1049 - Rxn1050 - Rxn1051 - Rxn1052 dydt[Species000094] = 0 - Rxn194 - Rxn195 - Rxn196 - Rxn197 - Rxn198 - Rxn199 + Rxn394 - Rxn815 - Rxn816 - Rxn909 + Rxn1016 + Rxn1034 - Rxn1053 - Rxn1054 - Rxn1055 - Rxn1056 dydt[Species000095] = 0 - Rxn200 - Rxn201 - Rxn202 - Rxn203 + Rxn464 + Rxn515 - Rxn817 - Rxn818 - Rxn910 - Rxn911 + Rxn1033 - Rxn1057 - Rxn1058 - Rxn1059 - Rxn1060 - Rxn1061 dydt[Species000096] = 0 - Rxn204 - Rxn205 - Rxn206 - Rxn207 - Rxn208 - Rxn209 - Rxn210 + Rxn460 - Rxn819 - Rxn820 - Rxn821 - Rxn912 - Rxn913 - Rxn914 + Rxn1017 + Rxn1022 + Rxn1048 + Rxn1056 - Rxn1062 - Rxn1063 - Rxn1064 - Rxn1065 - Rxn1066 dydt[Species000097] = 0 - Rxn211 - Rxn212 - Rxn213 - Rxn214 - Rxn215 - Rxn216 - Rxn217 + Rxn397 + Rxn408 + Rxn467 + Rxn473 + Rxn495 - Rxn822 - Rxn823 - Rxn824 - Rxn915 - Rxn916 - Rxn917 + Rxn1023 + Rxn1032 + Rxn1040 + Rxn1062 - Rxn1067 - Rxn1068 - Rxn1069 - Rxn1070 dydt[Species000098] = 0 - Rxn218 - Rxn219 - Rxn220 - Rxn221 - Rxn222 - Rxn223 - Rxn224 - Rxn225 + Rxn419 + Rxn491 - Rxn825 - Rxn826 - Rxn827 - Rxn828 - Rxn829 - Rxn918 - Rxn919 - Rxn920 + Rxn1027 + Rxn1031 + Rxn1052 + Rxn1058 + Rxn1068 - Rxn1071 - Rxn1072 - Rxn1073 - Rxn1074 - Rxn1075 - Rxn1076 dydt[Species000099] = 0 - Rxn226 - Rxn227 - Rxn228 - Rxn229 - Rxn230 - Rxn231 - Rxn830 - Rxn831 - Rxn832 - Rxn833 - Rxn921 + Rxn1037 + Rxn1057 + Rxn1073 - Rxn1077 - Rxn1078 - Rxn1079 dydt[Species000100] = 0 - Rxn232 - Rxn233 - Rxn234 - Rxn235 - Rxn236 - Rxn834 - Rxn835 - Rxn836 - Rxn922 + Rxn1039 + Rxn1046 + Rxn1079 - Rxn1080 - Rxn1081 - Rxn1082 dydt[Species000101] = 0 - Rxn237 - Rxn238 - Rxn239 - Rxn240 - Rxn241 - Rxn242 - Rxn243 + Rxn402 + Rxn414 + Rxn471 + Rxn499 - Rxn837 - Rxn838 - Rxn839 - Rxn840 - Rxn923 - Rxn924 - Rxn925 + Rxn1019 + Rxn1035 + Rxn1051 + Rxn1061 + Rxn1082 - Rxn1083 - Rxn1084 - Rxn1085 - Rxn1086 - Rxn1087 dydt[Species000102] = 0 - Rxn244 - Rxn245 - Rxn246 + Rxn550 - Rxn841 - Rxn842 - Rxn926 + Rxn1021 + Rxn1087 - Rxn1088 - Rxn1089 dydt[Species000103] = 0 - Rxn247 - Rxn248 - Rxn249 - Rxn250 + Rxn529 - Rxn843 - Rxn844 - Rxn927 + Rxn1028 + Rxn1043 + Rxn1072 - Rxn1090 - Rxn1091 dydt[Species000104] = 0 - Rxn251 - Rxn252 - Rxn253 - Rxn254 - Rxn255 - Rxn256 - Rxn257 - Rxn845 - Rxn846 - Rxn847 - Rxn848 - Rxn849 - Rxn928 - Rxn929 + Rxn1041 + Rxn1047 + Rxn1063 + Rxn1067 + Rxn1080 + Rxn1091 - Rxn1092 - Rxn1093 dydt[Species000105] = 0 - Rxn258 - Rxn259 - Rxn260 - Rxn261 - Rxn262 - Rxn263 + Rxn487 - Rxn850 - Rxn851 - Rxn852 - Rxn853 - Rxn930 + Rxn1038 + Rxn1042 + Rxn1071 + Rxn1078 + Rxn1092 dydt[Species000106] = 0 - Rxn264 - Rxn265 - Rxn266 - Rxn267 - Rxn268 - Rxn931 + Rxn1055 + Rxn1086 + Rxn1088 - Rxn1094 - Rxn1095 dydt[Species000107] = 0 - Rxn269 - Rxn270 - Rxn271 - Rxn272 - Rxn273 - Rxn274 + Rxn468 + Rxn478 - Rxn854 - Rxn855 - Rxn932 + Rxn1050 + Rxn1070 + Rxn1081 + Rxn1085 - Rxn1096 - Rxn1097 - Rxn1098 dydt[Species000108] = 0 - Rxn275 - Rxn276 - Rxn277 - Rxn278 - Rxn279 - Rxn280 - Rxn856 - Rxn857 - Rxn933 + Rxn1049 + Rxn1066 + Rxn1089 + Rxn1094 + Rxn1097 - Rxn1099 dydt[Species000109] = 0 - Rxn281 - Rxn282 - Rxn283 - Rxn284 - Rxn285 - Rxn286 - Rxn858 - Rxn859 - Rxn934 + Rxn1044 + Rxn1053 + Rxn1076 - Rxn1100 - Rxn1101 dydt[Species000110] = 0 - Rxn287 - Rxn288 - Rxn289 - Rxn290 - Rxn291 - Rxn292 - Rxn293 - Rxn860 - Rxn861 - Rxn862 - Rxn935 + Rxn1064 + Rxn1074 + Rxn1084 + Rxn1098 + Rxn1099 - Rxn1102 - Rxn1103 - Rxn1104 dydt[Species000111] = 0 - Rxn294 - Rxn295 - Rxn296 - Rxn297 - Rxn298 - Rxn299 + Rxn465 - Rxn863 - Rxn936 + Rxn1054 + Rxn1060 + Rxn1083 + Rxn1095 + Rxn1101 + Rxn1103 dydt[Species000112] = 0 - Rxn300 - Rxn301 - Rxn302 - Rxn303 - Rxn304 - Rxn305 - Rxn864 - Rxn865 - Rxn866 - Rxn937 + Rxn1045 + Rxn1065 + Rxn1090 + Rxn1093 + Rxn1100 + Rxn1104 dydt[Species000113] = 0 - Rxn306 - Rxn307 - Rxn308 - Rxn309 - Rxn310 - Rxn311 - Rxn312 - Rxn867 - Rxn868 - Rxn869 - Rxn870 - Rxn938 + Rxn1059 + Rxn1069 + Rxn1075 + Rxn1077 + Rxn1096 + Rxn1102 dydt[Species000114] = 0 - Rxn633 + Rxn785 + Rxn792 + Rxn806 - Rxn1222 dydt[Species000115] = 0 - Rxn634 + Rxn791 + Rxn814 + Rxn836 - Rxn1223 dydt[Species000116] = 0 - Rxn635 + Rxn797 + Rxn844 + Rxn850 - Rxn1224 - Rxn1225 dydt[Species000117] = 0 - Rxn636 + Rxn802 + Rxn829 + Rxn830 - Rxn1226 dydt[Species000118] = 0 - Rxn637 + Rxn805 + Rxn853 - Rxn1227 dydt[Species000119] = 0 - Rxn638 + Rxn800 + Rxn803 + Rxn818 - Rxn1228 - Rxn1229 dydt[Species000120] = 0 - Rxn639 + Rxn786 + Rxn793 + Rxn808 + Rxn826 + Rxn845 - Rxn1230 - Rxn1231 - Rxn1232 dydt[Species000121] = 0 - Rxn640 + Rxn788 + Rxn796 + Rxn798 + Rxn809 + Rxn811 - Rxn1233 - Rxn1234 - Rxn1235 dydt[Species000122] = 0 - Rxn641 + Rxn787 + Rxn807 + Rxn832 - Rxn1236 - Rxn1237 dydt[Species000123] = 0 - Rxn642 + Rxn816 + Rxn859 dydt[Species000124] = 0 - Rxn643 + Rxn820 + Rxn840 + Rxn841 + Rxn848 + Rxn857 - Rxn1238 - Rxn1239 - Rxn1240 dydt[Species000125] = 0 - Rxn644 + Rxn794 + Rxn810 + Rxn827 + Rxn834 + Rxn846 - Rxn1241 - Rxn1242 - Rxn1243 - Rxn1244 dydt[Species000126] = 0 - Rxn645 + Rxn790 + Rxn813 + Rxn849 + Rxn862 - Rxn1245 - Rxn1246 - Rxn1247 dydt[Species000127] = 0 - Rxn646 + Rxn789 + Rxn843 + Rxn847 + Rxn868 - Rxn1248 - Rxn1249 - Rxn1250 - Rxn1251 dydt[Species000128] = 0 - Rxn647 + Rxn815 + Rxn822 + Rxn835 + Rxn839 + Rxn863 - Rxn1252 - Rxn1253 - Rxn1254 - Rxn1255 dydt[Species000129] = 0 - Rxn648 + Rxn821 + Rxn866 - Rxn1256 - Rxn1257 dydt[Species000130] = 0 - Rxn649 + Rxn801 + Rxn828 + Rxn852 + Rxn870 - Rxn1258 - Rxn1259 - Rxn1260 - Rxn1261 dydt[Species000131] = 0 - Rxn650 + Rxn795 + Rxn833 - Rxn1262 - Rxn1263 dydt[Species000132] = 0 - Rxn651 + Rxn799 + Rxn804 + Rxn825 + Rxn831 + Rxn860 - Rxn1264 - Rxn1265 - Rxn1266 - Rxn1267 dydt[Species000133] = 0 - Rxn652 + Rxn817 + Rxn824 + Rxn837 + Rxn851 + Rxn855 - Rxn1268 - Rxn1269 - Rxn1270 - Rxn1271 dydt[Species000134] = 0 + Rxn842 + Rxn865 - Rxn1272 - Rxn1273 dydt[Species000135] = 0 + Rxn819 + Rxn869 - Rxn1274 - Rxn1275 dydt[Species000136] = 0 + Rxn812 + Rxn854 + Rxn856 + Rxn858 + Rxn864 - Rxn1276 - Rxn1277 - Rxn1278 - Rxn1279 dydt[Species000137] = 0 + Rxn823 + Rxn838 + Rxn861 + Rxn867 - Rxn1280 - Rxn1281 - Rxn1282 - Rxn1283 dydt[Species000138] = 0 - Rxn8 - Rxn653 + Rxn890 + Rxn898 + Rxn906 + Rxn1222 + Rxn1225 + Rxn1230 + Rxn1235 dydt[Species000139] = 0 - Rxn9 - Rxn654 + Rxn894 + Rxn914 + Rxn929 + Rxn1223 + Rxn1240 + Rxn1247 + Rxn1256 dydt[Species000140] = 0 - Rxn10 - Rxn655 + Rxn892 + Rxn895 + Rxn901 + Rxn905 + Rxn911 + Rxn922 + Rxn1229 + Rxn1231 + Rxn1234 + Rxn1236 + Rxn1241 + Rxn1250 + Rxn1254 + Rxn1261 + Rxn1270 dydt[Species000141] = 0 - Rxn11 - Rxn656 + Rxn899 + Rxn903 + Rxn924 + Rxn1228 + Rxn1233 + Rxn1255 + Rxn1264 + Rxn1271 dydt[Species000142] = 0 - Rxn12 - Rxn657 + Rxn891 + Rxn897 + Rxn904 + Rxn920 + Rxn921 + Rxn928 + Rxn1224 + Rxn1227 + Rxn1232 + Rxn1237 + Rxn1242 + Rxn1248 + Rxn1260 + Rxn1262 + Rxn1265 dydt[Species000143] = 0 - Rxn658 + Rxn902 + Rxn917 + Rxn930 + Rxn1226 + Rxn1258 + Rxn1269 dydt[Species000144] = 0 + Rxn915 + Rxn925 + Rxn931 + Rxn1238 + Rxn1252 + Rxn1282 dydt[Species000145] = 0 + Rxn908 + Rxn909 + Rxn926 + Rxn927 + Rxn932 + Rxn936 + Rxn1239 + Rxn1245 + Rxn1249 + Rxn1253 + Rxn1273 + Rxn1278 dydt[Species000146] = 0 + Rxn893 + Rxn913 + Rxn916 + Rxn934 + Rxn937 + Rxn938 + Rxn1246 + Rxn1251 + Rxn1257 + Rxn1272 + Rxn1275 + Rxn1279 + Rxn1283 dydt[Species000147] = 0 - Rxn13 + Rxn907 + Rxn1243 + Rxn1277 dydt[Species000148] = 0 - Rxn14 + Rxn896 + Rxn910 + Rxn912 + Rxn918 + Rxn923 + Rxn933 + Rxn1244 + Rxn1263 + Rxn1266 + Rxn1268 + Rxn1274 + Rxn1276 + Rxn1281 dydt[Species000149] = 0 - Rxn15 + Rxn900 + Rxn919 + Rxn935 + Rxn1259 + Rxn1267 + Rxn1280 dydt[Species000150] = 0 + Rxn8 - Rxn659 + Rxn694 + Rxn697 + Rxn698 dydt[Species000151] = 0 + Rxn11 - Rxn660 dydt[Species000152] = 0 + Rxn9 - Rxn661 dydt[Species000153] = 0 + Rxn10 - Rxn662 dydt[Species000154] = 0 + Rxn12 - Rxn663 dydt[Species000155] = 0 + Rxn13 dydt[Species000156] = 0 + Rxn14 dydt[Species000157] = 0 + Rxn15 dydt[Species000158] = 0 - Rxn313 - Rxn314 - Rxn315 - Rxn316 - Rxn317 - Rxn1105 - Rxn1106 - Rxn1107 dydt[Species000159] = 0 - Rxn318 - Rxn319 - Rxn320 - Rxn321 - Rxn322 - Rxn323 - Rxn324 - Rxn325 + Rxn1107 - Rxn1108 - Rxn1109 - Rxn1110 - Rxn1111 dydt[Species000160] = 0 - Rxn326 - Rxn327 - Rxn328 - Rxn329 - Rxn330 - Rxn331 - Rxn332 - Rxn333 + Rxn1109 - Rxn1112 dydt[Species000161] = 0 - Rxn664 - Rxn1284 dydt[Species000162] = 0 - Rxn16 - Rxn665 + Rxn1284 dydt[Species000163] = 0 + Rxn16 - Rxn666 dydt[Species000164] = 0 - Rxn334 - Rxn335 - Rxn336 - Rxn337 - Rxn1113 - Rxn1114 - Rxn1115 dydt[Species000165] = 0 - Rxn338 - Rxn339 - Rxn340 - Rxn341 - Rxn342 - Rxn343 - Rxn344 + Rxn1115 - Rxn1116 - Rxn1117 dydt[Species000166] = 0 - Rxn345 - Rxn346 - Rxn347 - Rxn348 - Rxn349 - Rxn350 + Rxn1117 - Rxn1118 - Rxn1119 dydt[Species000167] = 0 - Rxn667 - Rxn1285 dydt[Species000168] = 0 - Rxn17 - Rxn668 + Rxn1285 dydt[Species000169] = 0 + Rxn17 - Rxn669 dydt[Species000170] = 0 - Rxn351 - Rxn352 - Rxn353 - Rxn354 - Rxn1120 - Rxn1121 - Rxn1122 - Rxn1123 dydt[Species000171] = 0 - Rxn355 - Rxn356 - Rxn357 - Rxn358 - Rxn359 - Rxn360 - Rxn361 + Rxn1123 - Rxn1124 - Rxn1125 dydt[Species000172] = 0 - Rxn362 - Rxn363 - Rxn364 - Rxn365 - Rxn366 - Rxn367 + Rxn1124 - Rxn1126 - Rxn1127 dydt[Species000173] = 0 - Rxn670 - Rxn1286 dydt[Species000174] = 0 - Rxn18 - Rxn671 + Rxn1286 dydt[Species000175] = 0 + Rxn18 - Rxn672 dydt[Species000188] = 0 + Rxn557 + Rxn566 + Rxn580 + Rxn587 dydt[Species000189] = 0 + Rxn556 + Rxn565 + Rxn573 + Rxn579 + Rxn586 + Rxn594 dydt[Species000190] = 0 + Rxn554 + Rxn564 + Rxn572 + Rxn577 + Rxn584 + Rxn593 dydt[Species000194] = 0 + Rxn555 + Rxn562 + Rxn570 + Rxn578 + Rxn585 + Rxn591 dydt[Species000336] = 0 - Rxn673 dydt[Species000337] = 0 - Rxn674 dydt[Species000338] = 0 - Rxn675 dydt[Species000339] = 0 - Rxn676 dydt[Species000340] = 0 - Rxn677 dydt[Species000341] = 0 - Rxn678 dydt[Species000382] = 0 + Rxn21 dydt[Species000423] = 0 + Rxn19 dydt[Species000880] = 0 - Rxn679 dydt[Species000881] = 0 - Rxn680 dydt[Species000882] = 0 - Rxn681 dydt[Species000883] = 0 - Rxn682 dydt[Species000884] = 0 - Rxn683 dydt[Species000885] = 0 - Rxn684 dydt[Species000886] = 0 - Rxn685 dydt[Species000927] = 0 - Rxn686 dydt[Species000928] = 0 - Rxn687 dydt[Species000929] = 0 - Rxn688 dydt[Species000930] = 0 - Rxn689 dydt[Species000931] = 0 - Rxn690 dydt[Species000932] = 0 - Rxn691 dydt[Species001015] = 0 - Rxn692 dydt[Species001016] = 0 - Rxn693 - Rxn694 dydt[Species001017] = 0 + Rxn27 - Rxn695 dydt[Species001419] = 0 - Rxn368 - Rxn369 - Rxn370 - Rxn371 - Rxn372 - Rxn373 - Rxn374 - Rxn375 - Rxn376 + Rxn1105 + Rxn1111 - Rxn1128 - Rxn1129 - Rxn1130 - Rxn1131 - Rxn1132 - Rxn1133 dydt[Species001420] = 0 - Rxn377 - Rxn378 - Rxn379 - Rxn380 - Rxn381 - Rxn382 - Rxn383 + Rxn1114 + Rxn1116 + Rxn1118 - Rxn1134 - Rxn1135 - Rxn1136 - Rxn1137 - Rxn1138 dydt[Species001421] = 0 - Rxn384 - Rxn385 - Rxn386 - Rxn387 - Rxn388 - Rxn389 + Rxn1122 + Rxn1125 - Rxn1139 - Rxn1140 - Rxn1141 dydt[Species001506] = 0 - Rxn696 - Rxn697 dydt[Species001507] = 0 - Rxn698 dydt[Species001548] = 0 - Rxn699 dydt[Species001860] = 0 - Rxn700 dydt[Species001900] = 0 - Rxn701 dydt[Species002245] = 0 - Rxn390 - Rxn391 - Rxn392 - Rxn393 - Rxn394 - Rxn395 - Rxn396 - Rxn397 + Rxn1128 - Rxn1142 - Rxn1143 - Rxn1144 - Rxn1145 dydt[Species002246] = 0 - Rxn398 - Rxn399 - Rxn400 - Rxn401 - Rxn402 + Rxn1130 - Rxn1146 - Rxn1147 - Rxn1148 dydt[Species002247] = 0 - Rxn403 - Rxn404 - Rxn405 - Rxn406 - Rxn407 - Rxn408 + Rxn1134 - Rxn1149 - Rxn1150 - Rxn1151 - Rxn1152 dydt[Species002248] = 0 - Rxn409 - Rxn410 - Rxn411 - Rxn412 - Rxn413 - Rxn414 + Rxn1135 - Rxn1153 - Rxn1154 - Rxn1155 - Rxn1156 - Rxn1157 - Rxn1158 dydt[Species002249] = 0 - Rxn415 - Rxn416 - Rxn417 - Rxn418 - Rxn419 + Rxn1139 - Rxn1159 - Rxn1160 - Rxn1161 - Rxn1162 dydt[Species002250] = 0 - Rxn420 - Rxn421 - Rxn422 - Rxn423 - Rxn424 + Rxn1127 + Rxn1140 - Rxn1163 - Rxn1164 - Rxn1165 - Rxn1166 - Rxn1167 dydt[Species002337] = 0 - Rxn425 - Rxn426 - Rxn427 - Rxn428 - Rxn429 - Rxn430 - Rxn431 - Rxn432 - Rxn433 + Rxn1106 + Rxn1132 + Rxn1144 - Rxn1168 - Rxn1169 - Rxn1170 - Rxn1171 dydt[Species002338] = 0 - Rxn434 - Rxn435 - Rxn436 - Rxn437 - Rxn438 - Rxn439 - Rxn440 + Rxn1113 + Rxn1137 + Rxn1151 + Rxn1155 - Rxn1172 - Rxn1173 dydt[Species002339] = 0 - Rxn441 - Rxn442 - Rxn443 - Rxn444 - Rxn445 - Rxn446 + Rxn1120 + Rxn1126 + Rxn1141 + Rxn1166 - Rxn1174 - Rxn1175 - Rxn1176 - Rxn1177 - Rxn1178 dydt[Species002340] = 0 - Rxn447 - Rxn448 - Rxn449 - Rxn450 - Rxn451 - Rxn452 + Rxn1121 + Rxn1161 + Rxn1178 - Rxn1179 - Rxn1180 - Rxn1181 dydt[Species002501] = 0 - Rxn453 - Rxn454 - Rxn455 - Rxn456 - Rxn457 - Rxn458 - Rxn459 - Rxn460 + Rxn1108 + Rxn1112 + Rxn1142 + Rxn1171 dydt[Species002502] = 0 - Rxn461 - Rxn462 - Rxn463 - Rxn464 - Rxn465 - Rxn466 - Rxn467 - Rxn468 + Rxn1143 + Rxn1147 - Rxn1182 dydt[Species002503] = 0 - Rxn469 - Rxn470 - Rxn471 - Rxn472 - Rxn473 + Rxn1150 + Rxn1157 - Rxn1183 - Rxn1184 - Rxn1185 dydt[Species002504] = 0 - Rxn474 - Rxn475 - Rxn476 - Rxn477 - Rxn478 + Rxn1149 + Rxn1153 + Rxn1185 - Rxn1186 dydt[Species002505] = 0 - Rxn479 - Rxn480 - Rxn481 - Rxn482 - Rxn483 + Rxn1154 + Rxn1184 - Rxn1187 - Rxn1188 dydt[Species002506] = 0 - Rxn484 - Rxn485 - Rxn486 - Rxn487 + Rxn1159 - Rxn1189 dydt[Species002507] = 0 - Rxn488 - Rxn489 - Rxn490 - Rxn491 + Rxn1160 + Rxn1164 - Rxn1190 - Rxn1191 dydt[Species002508] = 0 - Rxn492 - Rxn493 - Rxn494 - Rxn495 + Rxn1163 + Rxn1191 - Rxn1192 dydt[Species002509] = 0 - Rxn496 - Rxn497 - Rxn498 - Rxn499 + Rxn1165 - Rxn1193 dydt[Species002542] = 0 - Rxn500 - Rxn501 - Rxn502 - Rxn503 - Rxn504 - Rxn505 - Rxn506 + Rxn1131 + Rxn1145 + Rxn1168 - Rxn1194 dydt[Species002543] = 0 - Rxn507 - Rxn508 - Rxn509 - Rxn510 - Rxn511 - Rxn512 - Rxn513 - Rxn514 - Rxn515 + Rxn1129 + Rxn1146 + Rxn1170 + Rxn1182 dydt[Species002544] = 0 - Rxn516 - Rxn517 - Rxn518 - Rxn519 - Rxn520 - Rxn521 + Rxn1136 + Rxn1152 + Rxn1172 + Rxn1188 dydt[Species002545] = 0 - Rxn522 - Rxn523 - Rxn524 + Rxn1156 + Rxn1173 + Rxn1186 dydt[Species002546] = 0 - Rxn525 - Rxn526 - Rxn527 - Rxn528 - Rxn529 + Rxn1162 + Rxn1174 + Rxn1181 + Rxn1193 - Rxn1195 dydt[Species002547] = 0 - Rxn530 - Rxn531 - Rxn532 + Rxn1167 + Rxn1176 + Rxn1192 - Rxn1196 dydt[Species002548] = 0 - Rxn533 - Rxn534 - Rxn535 - Rxn536 - Rxn537 + Rxn1177 + Rxn1179 + Rxn1189 + Rxn1195 dydt[Species002549] = 0 - Rxn538 - Rxn539 - Rxn540 - Rxn541 - Rxn542 + Rxn1175 + Rxn1180 + Rxn1190 + Rxn1196 dydt[Species002575] = 0 - Rxn543 - Rxn544 - Rxn545 - Rxn546 - Rxn547 - Rxn548 - Rxn549 - Rxn550 + Rxn1110 + Rxn1133 + Rxn1148 dydt[Species002576] = 0 - Rxn551 - Rxn552 - Rxn553 + Rxn1119 + Rxn1138 + Rxn1158 + Rxn1183 + Rxn1187 dydt[Species002581] = 0 + Rxn20 dydt[Species002582] = 0 + Rxn22 dydt[Species002583] = 0 - Rxn19 - Rxn20 dydt[Species002584] = 0 - Rxn21 - Rxn22 dydt[Species002732] = 0 + Rxn673 + Rxn674 + Rxn675 + Rxn676 + Rxn677 + Rxn678 dydt[Species002733] = 0 + Rxn679 + Rxn680 + Rxn681 + Rxn682 + Rxn683 + Rxn684 + Rxn685 dydt[Species002734] = 0 + Rxn686 + Rxn687 + Rxn688 + Rxn689 + Rxn690 + Rxn691 dydt[Species003033] = 0 + Rxn23 - Rxn702 dydt[Species003034] = 0 + Rxn24 - Rxn703 dydt[Species003035] = 0 + Rxn25 - Rxn704 dydt[Species003113] = 0 + Rxn26 dydt[Species004069] = 0 - Rxn705 dydt[Species004070] = 0 - Rxn706 dydt[Species004071] = 0 - Rxn707 dydt[Species005395] = 0 + Rxn559 + Rxn567 + Rxn574 + Rxn582 + Rxn589 + Rxn595 dydt[Species005396] = 0 + Rxn560 + Rxn568 + Rxn575 + Rxn590 + Rxn596 dydt[Species005397] = 0 + Rxn561 + Rxn569 + Rxn576 + Rxn583 + Rxn597 dydt[Species005398] = 0 - Rxn554 - Rxn555 - Rxn556 - Rxn557 - Rxn558 - Rxn559 - Rxn560 - Rxn561 dydt[Species005399] = 0 - Rxn562 - Rxn563 - Rxn564 - Rxn565 - Rxn566 - Rxn567 - Rxn568 - Rxn569 dydt[Species005400] = 0 - Rxn570 - Rxn571 - Rxn572 - Rxn573 - Rxn574 - Rxn575 - Rxn576 dydt[Species005472] = 0 - Rxn577 - Rxn578 - Rxn579 - Rxn580 - Rxn581 - Rxn582 - Rxn583 dydt[Species005473] = 0 - Rxn584 - Rxn585 - Rxn586 - Rxn587 - Rxn588 - Rxn589 - Rxn590 dydt[Species005474] = 0 - Rxn591 - Rxn592 - Rxn593 - Rxn594 - Rxn595 - Rxn596 - Rxn597 dydt[Species006258] = 0 + Rxn598 + Rxn605 + Rxn611 dydt[Species006259] = 0 + Rxn600 + Rxn604 + Rxn610 dydt[Species006260] = 0 + Rxn601 + Rxn606 + Rxn612 dydt[Species006261] = 0 + Rxn602 + Rxn607 + Rxn613 dydt[Species006262] = 0 + Rxn603 + Rxn608 + Rxn614 dydt[Species006263] = 0 - Rxn598 - Rxn599 - Rxn600 - Rxn601 - Rxn602 - Rxn603 dydt[Species006264] = 0 - Rxn604 - Rxn605 - Rxn606 - Rxn607 - Rxn608 - Rxn609 dydt[Species006265] = 0 - Rxn610 - Rxn611 - Rxn612 - Rxn613 - Rxn614 - Rxn615 dydt[Species006298] = 0 + Rxn599 + Rxn609 + Rxn615 dydt[Species006422] = 0 - Rxn23 dydt[Species006423] = 0 - Rxn24 dydt[Species006424] = 0 - Rxn25 dydt[Species006462] = 0 - Rxn26 dydt[Species006709] = 0 - Rxn708 dydt[Species007862] = 0 + Rxn2 dydt[Species008525] = 0 - Rxn27 - Rxn709 dydt[Species008900] = 0 + Rxn28 - Rxn710 dydt[Species008902] = 0 - Rxn616 - Rxn617 - Rxn618 - Rxn619 - Rxn620 - Rxn621 - Rxn622 - Rxn623 - Rxn624 + Rxn1169 + Rxn1194 dydt[Species008947] = 0 + Rxn29 - Rxn711 dydt[Species008948] = 0 - Rxn28 - Rxn712 dydt[Species008952] = 0 - Rxn29 - Rxn713 dydt[Species008953] = 0 + Rxn702 + Rxn703 + Rxn704 dydt[Species008956] = 0 + Rxn705 + Rxn706 + Rxn707 dydt[Species008969] = 0 + Rxn30 dydt[Species008978] = 0 - Rxn30 dydt[Species008981] = 0 - Rxn714

RxnID RxnFamID RxnFamName SiteIndex Reversibility Coeff SpcID
Rxn1 RF1 Aromatization 2 1 -1 Species000012 1 Species000011 3 Species000023
Rxn2 RF1 Aromatization 2 1 -1 Species000015 3 Species000023 1 Species007862
Rxn3 RF1 Aromatization 2 1 -1 Species000050 3 Species000023 1 Species000051
Rxn4 RF1 Aromatization 2 1 -1 Species000078 3 Species000023 1 Species000083
Rxn5 RF1 Aromatization 2 1 -1 Species000079 3 Species000023 1 Species000084
Rxn6 RF1 Aromatization 2 1 -1 Species000080 3 Species000023 1 Species000085
Rxn7 RF1 Aromatization 2 1 -1 Species000082 3 Species000023 1 Species000086
Rxn8 RF1 Aromatization 2 1 -1 Species000138 3 Species000023 1 Species000150
Rxn9 RF1 Aromatization 2 1 -1 Species000139 3 Species000023 1 Species000152
Rxn10 RF1 Aromatization 2 1 -1 Species000140 3 Species000023 1 Species000153
Rxn11 RF1 Aromatization 2 1 -1 Species000141 3 Species000023 1 Species000151
Rxn12 RF1 Aromatization 2 1 -1 Species000142 3 Species000023 1 Species000154
Rxn13 RF1 Aromatization 2 1 -1 Species000147 3 Species000023 1 Species000155
Rxn14 RF1 Aromatization 2 1 -1 Species000148 3 Species000023 1 Species000156
Rxn15 RF1 Aromatization 2 1 -1 Species000149 3 Species000023 1 Species000157
Rxn16 RF1 Aromatization 2 1 -1 Species000162 3 Species000023 1 Species000163
Rxn17 RF1 Aromatization 2 1 -1 Species000168 3 Species000023 1 Species000169
Rxn18 RF1 Aromatization 2 1 -1 Species000174 3 Species000023 1 Species000175
Rxn19 RF1 Aromatization 2 1 -1 Species002583 3 Species000023 1 Species000423
Rxn20 RF1 Aromatization 2 1 -1 Species002583 3 Species000023 1 Species002581
Rxn21 RF1 Aromatization 2 1 -1 Species002584 3 Species000023 1 Species000382
Rxn22 RF1 Aromatization 2 1 -1 Species002584 3 Species000023 1 Species002582
Rxn23 RF1 Aromatization 2 1 -1 Species006422 3 Species000023 1 Species003033
Rxn24 RF1 Aromatization 2 1 -1 Species006423 3 Species000023 1 Species003034
Rxn25 RF1 Aromatization 2 1 -1 Species006424 3 Species000023 1 Species003035
Rxn26 RF1 Aromatization 2 1 -1 Species006462 3 Species000023 1 Species003113
Rxn27 RF1 Aromatization 2 1 -1 Species008525 3 Species000023 1 Species001017
Rxn28 RF1 Aromatization 2 1 -1 Species008948 3 Species000023 1 Species008900
Rxn29 RF1 Aromatization 2 1 -1 Species008952 3 Species000023 1 Species008947
Rxn30 RF1 Aromatization 2 1 -1 Species008978 3 Species000023 1 Species008969
Rxn31 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000027 1 Species000022 1 Species000025
Rxn32 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000029 1 Species000022 1 Species000026
Rxn33 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000029 1 Species000024 1 Species000025
Rxn34 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000029 1 Species000022 1 Species000027
Rxn35 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000030 1 Species000022 1 Species000027
Rxn36 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000032 2 Species000025
Rxn37 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000032 1 Species000024 1 Species000027
Rxn38 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000032 1 Species000022 1 Species000028
Rxn39 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000032 1 Species000022 1 Species000029
Rxn40 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000033 1 Species000024 1 Species000026
Rxn41 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000033 1 Species000022 1 Species000028
Rxn42 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000033 1 Species000022 1 Species000029
Rxn43 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000034 1 Species000022 1 Species000029
Rxn44 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000034 1 Species000024 1 Species000027
Rxn45 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000034 1 Species000022 1 Species000030
Rxn46 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000035 1 Species000022 1 Species000029
Rxn47 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000035 2 Species000025
Rxn48 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000038 1 Species000025 1 Species000026
Rxn49 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000038 1 Species000025 1 Species000027
Rxn50 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000038 1 Species000020 1 Species000022
Rxn51 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000038 1 Species000024 1 Species000029
Rxn52 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000038 1 Species000022 1 Species000032
Rxn53 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000039 1 Species000024 1 Species000028
Rxn54 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000039 1 Species000020 1 Species000022
Rxn55 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000039 1 Species000025 1 Species000026
Rxn56 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000039 1 Species000022 1 Species000032
Rxn57 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000039 1 Species000024 1 Species000029
Rxn58 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000039 1 Species000022 1 Species000033
Rxn59 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000040 1 Species000024 1 Species000028
Rxn60 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000040 1 Species000022 1 Species000033
Rxn61 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000041 1 Species000025 1 Species000027
Rxn62 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000041 1 Species000022 1 Species000032
Rxn63 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000042 1 Species000025 1 Species000027
Rxn64 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000042 1 Species000024 1 Species000030
Rxn65 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000042 1 Species000022 1 Species000032
Rxn66 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000042 1 Species000022 1 Species000034
Rxn67 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000043 1 Species000024 1 Species000029
Rxn68 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000043 1 Species000022 1 Species000033
Rxn69 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000043 1 Species000022 1 Species000034
Rxn70 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000044 1 Species000025 1 Species000026
Rxn71 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000044 1 Species000024 1 Species000029
Rxn72 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000044 1 Species000022 1 Species000032
Rxn73 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000044 1 Species000022 1 Species000033
Rxn74 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000044 1 Species000022 1 Species000035
Rxn75 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000045 1 Species000022 1 Species000035
Rxn76 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000045 1 Species000025 1 Species000027
Rxn77 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000045 1 Species000022 1 Species000034
Rxn78 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000053 1 Species000026 1 Species000027
Rxn79 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000053 1 Species000025 1 Species000029
Rxn80 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000053 1 Species000025 1 Species000028
Rxn81 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000053 1 Species000022 1 Species000037
Rxn82 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000053 1 Species000024 1 Species000032
Rxn83 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000053 1 Species000022 1 Species000038
Rxn84 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000054 1 Species000025 1 Species000028
Rxn85 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000054 1 Species000022 1 Species000037
Rxn86 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000054 1 Species000024 1 Species000032
Rxn87 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000054 1 Species000022 1 Species000039
Rxn88 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000055 2 Species000026
Rxn89 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000055 1 Species000025 1 Species000029
Rxn90 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000055 1 Species000020 1 Species000024
Rxn91 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000055 1 Species000022 1 Species000037
Rxn92 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000055 1 Species000022 1 Species000038
Rxn93 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000055 1 Species000024 1 Species000033
Rxn94 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000055 1 Species000022 1 Species000039
Rxn95 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000056 1 Species000020 1 Species000024
Rxn96 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000056 1 Species000025 1 Species000028
Rxn97 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000056 1 Species000022 1 Species000039
Rxn98 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000056 1 Species000024 1 Species000033
Rxn99 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000056 1 Species000022 1 Species000040
Rxn100 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000057 1 Species000025 1 Species000029
Rxn101 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000057 2 Species000027
Rxn102 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000057 1 Species000022 1 Species000038
Rxn103 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000058 1 Species000026 1 Species000027
Rxn104 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000058 1 Species000025 1 Species000030
Rxn105 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000058 1 Species000022 1 Species000038
Rxn106 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000058 1 Species000024 1 Species000034
Rxn107 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000058 1 Species000022 1 Species000042
Rxn108 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000059 1 Species000025 1 Species000029
Rxn109 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000059 1 Species000026 1 Species000027
Rxn110 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000059 1 Species000022 1 Species000039
Rxn111 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000059 1 Species000024 1 Species000032
Rxn112 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000059 1 Species000022 1 Species000038
Rxn113 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000059 1 Species000022 1 Species000041
Rxn114 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000060 1 Species000024 1 Species000032
Rxn115 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000060 1 Species000022 1 Species000039
Rxn116 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000060 1 Species000025 1 Species000029
Rxn117 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000060 1 Species000022 1 Species000042
Rxn118 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000060 1 Species000024 1 Species000034
Rxn119 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000060 1 Species000022 1 Species000043
Rxn120 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000061 1 Species000025 1 Species000028
Rxn121 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000061 1 Species000022 1 Species000038
Rxn122 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000061 1 Species000025 1 Species000029
Rxn123 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000061 1 Species000022 1 Species000039
Rxn124 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000061 1 Species000024 1 Species000035
Rxn125 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000061 1 Species000022 1 Species000044
Rxn126 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000062 1 Species000025 1 Species000028
Rxn127 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000062 1 Species000024 1 Species000032
Rxn128 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000062 1 Species000022 1 Species000040
Rxn129 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000062 1 Species000022 1 Species000044
Rxn130 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000063 1 Species000024 1 Species000033
Rxn131 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000063 1 Species000022 1 Species000039
Rxn132 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000063 2 Species000026
Rxn133 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000063 1 Species000022 1 Species000044
Rxn134 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000064 1 Species000024 1 Species000033
Rxn135 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000064 1 Species000022 1 Species000040
Rxn136 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000064 1 Species000022 1 Species000043
Rxn137 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000065 2 Species000027
Rxn138 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000065 1 Species000025 1 Species000030
Rxn139 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000065 1 Species000022 1 Species000041
Rxn140 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000065 1 Species000022 1 Species000042
Rxn141 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000066 1 Species000026 1 Species000027
Rxn142 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000066 1 Species000024 1 Species000034
Rxn143 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000066 1 Species000022 1 Species000042
Rxn144 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000066 1 Species000022 1 Species000044
Rxn145 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000066 1 Species000022 1 Species000045
Rxn146 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000067 1 Species000025 1 Species000029
Rxn147 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000067 1 Species000022 1 Species000041
Rxn148 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000067 1 Species000022 1 Species000044
Rxn149 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000068 1 Species000025 1 Species000029
Rxn150 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000068 1 Species000024 1 Species000035
Rxn151 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000068 1 Species000022 1 Species000044
Rxn152 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000068 1 Species000022 1 Species000043
Rxn153 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000068 1 Species000022 1 Species000045
Rxn154 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000088 1 Species000027 1 Species000028
Rxn155 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000088 1 Species000026 1 Species000029
Rxn156 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000088 1 Species000020 1 Species000025
Rxn157 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000088 1 Species000022 1 Species000052
Rxn158 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000088 1 Species000025 1 Species000032
Rxn159 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000088 1 Species000024 1 Species000038
Rxn160 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000088 1 Species000022 1 Species000053
Rxn161 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000089 1 Species000020 1 Species000025
Rxn162 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000089 1 Species000022 1 Species000052
Rxn163 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000089 1 Species000026 1 Species000028
Rxn164 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000089 1 Species000024 1 Species000038
Rxn165 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000089 1 Species000022 1 Species000055
Rxn166 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000089 1 Species000025 1 Species000032
Rxn167 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000089 1 Species000024 1 Species000039
Rxn168 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000089 1 Species000022 1 Species000054
Rxn169 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000090 1 Species000026 1 Species000028
Rxn170 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000090 1 Species000026 1 Species000029
Rxn171 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000090 1 Species000024 1 Species000037
Rxn172 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000090 1 Species000022 1 Species000052
Rxn173 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000090 1 Species000022 1 Species000053
Rxn174 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000090 1 Species000025 1 Species000033
Rxn175 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000090 1 Species000024 1 Species000039
Rxn176 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000090 1 Species000022 1 Species000055
Rxn177 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000091 1 Species000026 1 Species000028
Rxn178 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000091 1 Species000025 1 Species000033
Rxn179 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000091 1 Species000024 1 Species000037
Rxn180 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000091 1 Species000022 1 Species000055
Rxn181 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000091 1 Species000024 1 Species000040
Rxn182 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000091 1 Species000022 1 Species000056
Rxn183 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000092 1 Species000020 1 Species000025
Rxn184 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000092 1 Species000024 1 Species000037
Rxn185 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000092 1 Species000024 1 Species000039
Rxn186 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000092 1 Species000022 1 Species000056
Rxn187 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000092 1 Species000022 1 Species000054
Rxn188 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000093 1 Species000027 1 Species000028
Rxn189 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000093 1 Species000025 1 Species000032
Rxn190 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000093 1 Species000022 1 Species000053
Rxn191 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000093 1 Species000022 1 Species000054
Rxn192 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000093 1 Species000024 1 Species000041
Rxn193 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000093 1 Species000022 1 Species000059
Rxn194 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000094 1 Species000026 1 Species000030
Rxn195 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000094 1 Species000025 1 Species000034
Rxn196 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000094 1 Species000027 1 Species000028
Rxn197 RF2 HDPParaffinCracking 1 0 -1 Species000023 -1 Species000094 1 Species000022 1 Species000053
Rxn198 RF2 HDPParaffinCracking 1 0

feeburn1 commented 2 years ago

typical reactor dimensions and T, P are RXR(0)Temp(K) 738.5233741 RXR(0)Pres(atm) 16.24497311 RXR(0)Length(dm) 82.296 RXR(0)InnerRadius(dm) 3.000375 RXR(0)OuterRadius(dm) 7.62 RXR(1)Temp(K) 743.0329439 RXR(1)Pres(atm) 15.84739343 RXR(1)Length(dm) 79.248 RXR(1)InnerRadius(dm) 3.508375 RXR(1)OuterRadius(dm) 10.668 RXR(2)Temp(K) 742.534079 RXR(2)Pres(atm) 15.44917017 RXR(2)Length(dm) 79.248 RXR(2)InnerRadius(dm) 3.508375 RXR(2)OuterRadius(dm) 10.668 RXR(3)Temp(K) 742.3765415 RXR(3)Pres(atm) 14.96113804 RXR(3)Length(dm) 82.296 RXR(3)InnerRadius(dm) 3.508375 RXR(3)OuterRadius(dm) 15.24 OutletTRxn550 654.6438694 OutletTRxn560 676.2603177 OutletTRxn570 713.8548204 OutletTRxn580 734.3361844 where "dm" is decimeter.

On Wed, Aug 31, 2022 at 2:07 PM Fee Burn @.***> wrote:

Nikhil Here are the files describing the stoichiometry, rxn network, phys props for getting Kea and set of dy/dt . Thanks

PS the reactor geometry is 4 reactors in series, with inter reactor heating, axial flow outward to a center pipe. dimensions are

On Wed, Aug 31, 2022 at 12:49 PM Fee Burn @.***> wrote:

No hurry, we can wait till you're ready to take this on.

Let me get the full set of files that describe the system, including phys props of each species.

Best, Hep

On Wed, Aug 31, 2022 at 9:19 AM Nikhil Yewale @.***> wrote:

I would love to take a shot at this, but i am pretty much tied up till atleast september 15th. Wild idea, can we parse the reactions as strings from those text file into julia syntax or catalyst syntax straightway ? I guess its not much far from Catalyst syntax

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isaacsas commented 1 year ago

I'm going to close this as it isn't really ReactionNetworkImporters related anymore (i.e. this is about some other file format we don't support).