Scott-Devine / MELT-LRA

MELT-LRA: Mobile Element Insertion Site Classifier
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Refine polyA/polyT detection #1

Closed jonathancrabtree closed 1 year ago

jonathancrabtree commented 1 year ago

Refine polyA/polyT detection; allow some number of non-consensus bases, perhaps using a sliding window and/or minimum A or T percentage. Current implementation stops extending polyA/polyT at the first non-A or non-T base.