SdeBlank NanoFG issues - Githubissues

SdeBlank / NanoFG

Third-generation fusion gene detection

GNU General Public License v3.0

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Bump certifi from 2022.12.7 to 2023.7.22

#26 dependabot[bot] opened 1 year ago
0
Errors with -b command

#25 Lalitha611 opened 1 year ago
1
Unable to locate the index file for the generated BAM file

#24 Lalitha611 closed 1 year ago
1
Bump requests from 2.22.0 to 2.31.0

#23 dependabot[bot] opened 1 year ago
0
Bump certifi from 2018.8.24 to 2022.12.7

#22 dependabot[bot] closed 1 year ago
0
Bump nltk from 3.6.5 to 3.6.6

#21 dependabot[bot] closed 2 years ago
0
Bump numpy from 1.16.3 to 1.22.0

#20 dependabot[bot] closed 2 years ago
0
Bump nltk from 3.4.5 to 3.6.5

#19 dependabot[bot] closed 2 years ago
0
Does NanoFG work on RNA sequencing?

#18 nadiadavidson closed 3 years ago
2
where to get GUIX profile and Mispriming

#17 N-damo closed 3 years ago
3
*.no_ctg.fa

#16 N-damo closed 3 years ago
7
error in FusionCheck.py Request failed for http://grch37.rest.ensembl.org/lookup/id/ENSG00000165609: Status code: 503 Reason: Service Unavailable Request failed for http://grch37.rest.ensembl.org/lookup/id/ENSG00000165630: Status code: 503 Reason: Service Unavailable

#15 chaimol closed 3 years ago
1
How to input the primer information?

#14 wbaopaul closed 3 years ago
15
Multiple hardcoded paths in your code

#13 patkarlab closed 4 years ago
1
last_params

#12 wdlv closed 4 years ago
2
Bump nltk from 3.4 to 3.4.5

#11 dependabot[bot] closed 4 years ago
1
Dev

#10 SdeBlank closed 4 years ago
0
Merging bams creates lower quality

#9 SdeBlank closed 5 years ago
0
Merge dev into master

#8 SdeBlank closed 5 years ago
0
Dev

#7 SdeBlank closed 5 years ago
0
Change from sambamba to samtools

#6 SdeBlank closed 5 years ago
0
Complex fusions

#5 SdeBlank closed 5 years ago
3
Crash on bam merge if only a single fusion candidate

#4 SdeBlank closed 5 years ago
0
Put working dev version into master

#3 SdeBlank closed 5 years ago
0
Pipeline issue in "$NUMBER_OF_SVS / $VCF_SPLIT_LINES + 1"

#2 SdeBlank closed 5 years ago
0
Canonical transcript with flags

#1 SdeBlank closed 5 years ago
1