Open KarvD opened 6 months ago
If you installed bowtie2 separately from conda it won't be 'seen' by conda when installing the preprocessing as it is listed as a dependency. As suggested but the error message
└─ bowtie2 >=2.0.0 , which does not exist (perhaps a missing channel).
You should also include the bioconda channel when installing the package (-c bioconda
), and that should solve the issue.
Regards, Francesco
For installation of the preprocessing I tried the code:
conda install preprocessing -c fasnicar
It returns:
Channels:
LibMambaUnsatisfiableError: Encountered problems while solving:
Could not solve for environment specs The following package could not be installed └─ preprocessing is not installable because it requires └─ bowtie2 >=2.0.0 , which does not exist (perhaps a missing channel).
I installed bowtie2 with the most recent version, and that part works. I am not sure how to solve this problem.