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Semantic-Observations / obs-models

Alignment of semantic observation models
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Select a microbial deep ocean data set and map to BCO #19

Open ramonawalls opened 9 years ago

ramonawalls commented 9 years ago

This is for the paper for the example use case that links environmental parameters to Omics data set.

@pbuttigieg - find a relevant dataset @rlwalls2008 and other volunteers - do mapping. Can be based on other BCO mappings like the NEON data set.

ramonawalls commented 9 years ago

Will use this data set from iMicrobe: http://mirrors.iplantcollaborative.org/browse/iplant/home/shared/imicrobe/projects/79/CAM_P_0000545.csv

Sequence data at http://mirrors.iplantcollaborative.org/browse/iplant/home/shared/imicrobe/projects/79/samples

Also described here: http://data.imicrobe.us/project/view/79

pbuttigieg commented 8 years ago

We decided to use an AWI data set and its associated data from: Biogeography of Deep-Sea Benthic Bacteria at Regional Scale

pbuttigieg commented 8 years ago

Initial representation attached - some work still needs to be done here, but we're translating this to RDF. SemantiObs_AWI3-copy.zip