'NoneType' object has no attribute 'subgraph'

Shamir-Lab / DOMINO

Network-based module discovery algorithm with high rate of empirically-validated term calls

MIT License

9 stars 2 forks source link

'NoneType' object has no attribute 'subgraph' #4

Closed SysMednet closed 2 years ago

SysMednet commented 2 years ago

Hi, I found that there's an error in the main domino.py code.

I used dip.sif in the examples file for the input, and executed the domino command.

it popped out the following message:

File "c:\users\\appdata\local\programs\python\python38\lib\site-packages\domino_python-0.1.1-py3.8.egg\src\core\domino.py",line 59, in create_subgraph
    res = G_modularity.subgraph(list(nodes))
AttributeError: 'NoneType' object has no attribute 'subgraph'

How can I solve this problem? thanks!

hag007 commented 2 years ago

Hi,

It seems like you're trying to run DOMINO on Windows OS. As mentioned in the README, DOMINO can be installed only on Linux OS. If you wish to run DOMINO from Windows, you can do this via the DOMINO website: http://domino.cs.tau.ac.il/

SysMednet commented 2 years ago

Thanks for your reply!