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Shamir-Lab / Recycler

This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33/4/475/2623362, by Roye Rozov, Aya Brown Kav, David Bogumil, Naama Shterzer, Eran Halperin, Itzhak Mizrahi, and Ron Shamir
BSD 3-Clause "New" or "Revised" License
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test #20

Closed tandler closed 6 years ago

tandler commented 6 years ago

Using Recycler-master.zip with python3 and try to get tests run. Introduce following patch: test.txt

Can you provide JJ1886_pe_primary.sort.bam for testing ?

dpellow commented 6 years ago

I've merged an updated version of the tests, let us know if there are still issues.