Support for GFA graph format?

Shamir-Lab / Recycler

This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33/4/475/2623362, by Roye Rozov, Aya Brown Kav, David Bogumil, Naama Shterzer, Eran Halperin, Itzhak Mizrahi, and Ron Shamir

BSD 3-Clause "New" or "Revised" License

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Support for GFA graph format? #37

Open VadimDu opened 5 years ago

VadimDu commented 5 years ago

Hello

Is there any chance to add support for GFA graph format? Currently as I understand Recycler only works with FASTG format New tools like Unicycler (basically a Spades assembler optimizer for isolates) output only in GFA format.

Best, Vadim