ShawHahnLab / chiimp

Computational, High-throughput Individual Identification through Microsatellite Profiling
GNU Affero General Public License v3.0
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Configuration reorganization #98

Closed ressy closed 1 year ago

ressy commented 1 year ago

The reorganizes the configuration system to use R's global options() features instead of a list, and to manage CHIIMP configuration options as CSV tables and simple data frames rather than YAML and nested lists. This should make configuration options less cumbersome to manage within the package, and make config files easier to manage for people not familiar with YAML. The old .yml files will still work, but internally they will be parsed into data frames and handled with the new workflow.