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ShawHahnLab / umbra

Python package and executable for Linux for managing Illumina sequencing runs
GNU Affero General Public License v3.0
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Add new "mergereads" task for read-merging with PEAR #121

Closed ressy closed 1 year ago

ressy commented 1 year ago

This adds a new task, mergereads, to merge forward and reverse trimmed reads together with PEAR. (It uses this awkward name because the existing read-interleaving task is using the name "merge" for historical reasons.) Fixes #119.