Include Project working directory in report and YAML files

ShawHahnLab / umbra

Python package and executable for Linux for managing Illumina sequencing runs

GNU Affero General Public License v3.0

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Include Project working directory in report and YAML files #23

Closed ressy closed 5 years ago

ressy commented 5 years ago

This modifies IlluminaProcessor to include a column in the CSV reports for the working directory name for each project found, and modifies ProjectData to keep this attribute stored in the metadata dictionary kept synced with its YAML equivalent on disk. This should make cross-referencing runs and projects easier and fix #15.