ShawHahnLab / umbra

Python package and executable for Linux for managing Illumina sequencing runs
GNU Affero General Public License v3.0
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Support configurable parent directories for task outputs #34

Closed ressy closed 5 years ago

ressy commented 5 years ago

This adds a task_options section to the configuration and passes it into each ProjectData object, supplying custom parent paths for log files and implicitly-required tasks, relative to a particular processing directory. (This does not add support for custom directory names per task.) Fixes #32 and fixes #33.