ShawnWx2019 / MetMiner

MetMiner: A user-friendly pipeline for large-scale plant metabolomics data analysis
MIT License
16 stars 1 forks source link

when run normalization, the soft report bug #2

Open xiefumin1 opened 2 weeks ago

xiefumin1 commented 2 weeks ago

运行到归一化时,界面变灰 。应该是出错了,查看R中的记录,发现报错如下:

Warning: Using `across()` in `filter()` was deprecated in dplyr 1.0.8.
ℹ Please use `if_any()` or `if_all()` instead.
ℹ The deprecated feature was likely used in the massdataset package.
  Please report the issue at <https://github.com/tidymass/massdataset/issues>.
This warning is displayed once every 8 hours.
Call `lifecycle::last_lifecycle_warnings()` to see where this warning was generated.
Joining with `by = join_by(variable_id, mz, rt, ion)`
Joining with `by = join_by(variable_id, mz, rt, ion)`
[1] "injection.order"
[1] "injection.order"
Batch 1 ...
  |============================================================================================| 100%

Warning: Error in purrr::map: ℹ In index: 1.
Caused by error in `dplyr::bind_rows()`:
! Argument 1 must be a data frame or a named atomic vector.
  3: runApp
  2: print.shiny.appobj
  1: <Anonymous>
The `name` provided ('chart') does not correspond to a known icon
The `name` provided ('chart') does not correspond to a known icon
The `name` provided ('chart') does not correspond to a known icon
ShawnWx2019 commented 2 weeks ago

貌似是在data_integration部分出错了,但是我不能确定,方便的话可以将工作目录下Result/NEG/Objects/object_neg_imput.rda 以及Result/POS/Objects/object_pos_imput.rda 文件发给我邮箱 shawndrive2019@12.com

xiefumin1 commented 2 weeks ago