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ShellyCoder / cellcall

inferring cell-cell communication from scRNA-seq of ligand-receptor
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error when run getHyperPathway #46

Open Stufen-TONG opened 10 months ago

Stufen-TONG commented 10 months ago

hi when i run this step pathway.hyper.list <- lapply(colnames(n), function(i){ print(i) tmp <- getHyperPathway(data = n, object = mt, cella_cellb = i, Org="Mus musculus") return(tmp) }) i encountered this problem as: Error in apply(path.list.tmp.df, 1, function(x) { : dim(X)must have a positive length(Error in apply(path.list.tmp.df, 1, function(x) { : dim(X)的值必需是正数) does anyone can help me , thanks in advanced

1584147690 commented 1 month ago

I encountered the same problem as you, how did you resolve it?

Stufen-TONG commented 1 month ago

Im so sorry i havent solve it. So I changed another r package.

---Original--- From: @.> Date: Tue, Jul 23, 2024 20:49 PM To: @.>; Cc: @.**@.>; Subject: Re: [ShellyCoder/cellcall] error when run getHyperPathway (Issue #46)

I encountered the same problem as you, how did you resolve it?

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