Open Shicheng-Guo opened 2 years ago
https://www.r-bloggers.com/2015/09/passing-arguments-to-an-r-script-from-command-lines/
#!/usr/bin/env Rscript library("optparse") option_list = list( make_option(c("-f", "--file"), type="character", default=NULL, help="dataset file name", metavar="character"), make_option(c("-o", "--out"), type="character", default="out.txt", help="output file name [default= %default]", metavar="character") ); opt_parser = OptionParser(option_list=option_list); opt = parse_args(opt_parser);
https://www.r-bloggers.com/2015/09/passing-arguments-to-an-r-script-from-command-lines/