Error: the condition has length > 1

HI, I tried running the example as written, but keep getting the following:

Setting results directory as /home/comp/data/ -> Removed previous error log file. -> Loading segmentation data... -> Checking data format of segmentation file... -> Keeping only chr 1-23 for CNV data... -> Creating temp directory ... -> Setting temp directory as /home/comp/data/temp -> Spliting seg data of samples to different files... --> Processing sample TCGA-DK-A1A6-10A-01D-A13V-01 ... -> Spliting seg data of samples done. -> Running RunAbsolute...(be patient) --> Processing sample TCGA-DK-A1A6-10A-01D-A13V-01 ... [1] "Capping 0 segs at tCR = 5.0" [1] "Expected copy-ratio = 1.00032" [1] "MAF file: not found." .----> Error detected, see log for more details. -> RunAbsolute done. Retrieving results... --> Files in cache directory: [1] "tmp" -> Checking result files... Warning in DoAbsolute(Seg = Seg, sigma.p = 0, max.sigma.h = 0.2, min.ploidy = 0.5, : --> Result file /home/titancomp11/Documents/Methylation/data/Copy_number/ABSOLUTE/temp/cache/TCGA-DK-A1A6-10A-01D-A13V-01.ABSOLUTE.RData does not exist, drop it. Error in DoAbsolute(Seg = Seg, sigma.p = 0, max.sigma.h = 0.2, min.ploidy = 0.5, : No result file to proceed.

Error file: Detected error in sample TCGA-DK-A1A6-10A-01D-A13V-01 Error message: the condition has length > 1 Where: if !is.na(res) { mode.tab[(i - 1) * n.d + j, ] <- c(res[[1]], res[[2]], res[[3]]) } Skipping this sample.

Running the core ABSOLUTE 1.0.6 package I get: [1] "Capping 0 segs at tCR = 5.0" [1] "Expected copy-ratio = 1.00032" [1] "MAF file: not found." .Error in if (!is.na(res)) { : the condition has length > 1

ShixiangWang / DoAbsolute

Error: the condition has length > 1 #22