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ShixiangWang / sigflow

Sigflow: Streamline Analysis Workflows for Mutational Signatures, https://github.com/ShixiangWang/sigflow/pkgs/container/sigflow
https://hub.docker.com/r/shixiangwang/sigflow
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使用容器技术进行封装 #4

Closed ShixiangWang closed 4 years ago

ShixiangWang commented 4 years ago

注意这里需要部署 Bioconductor 与 CRAN 的包下载，最好使用一个工具得到最快的镜像源

ShixiangWang commented 4 years ago

https://github.com/GuangchuangYu/mirrorselect

ShixiangWang commented 4 years ago

Docker

ShixiangWang commented 4 years ago

基础镜像：https://hub.docker.com/_/r-base 对应dockerfile：https://github.com/rocker-org/rocker/blob/206d35749495c5309183bfabaea90091eaff5cf4/r-base/latest/Dockerfile

ShixiangWang commented 4 years ago

基础镜像的使用方法

image

ShixiangWang commented 4 years ago

参考下 https://github.com/leoatchina/leoatchina-datasci 的写法

ShixiangWang commented 4 years ago

基本完成构建，后面需要不断地优化。