issues
search
ShixiangWang
/
sigminer
🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html
https://shixiangwang.github.io/sigminer/
Other
141
stars
18
forks
source link
v3 plan & roadmap
#456
Open
ShixiangWang
opened
3 months ago
ShixiangWang
commented
3 months ago
Target: A comprehensive mutational signature analysis platform
Data/Method Structure Design
[ ] Input data types (
https://mp.weixin.qq.com/s/dVH0sbtGFo8_WooWtmxy5g
)
[ ] Signature object and wrappers
...
[ ] Output data types
Features
[ ] Consistent data structures/classes
[ ] Consistent method/workflows
[ ] Modulized analysis and visualization support
[ ] Comprehensive/advanced algorithm implementation/plugins and supports
[ ] Shiny web application
[ ] Docker/docker-compose/singularity deployment
[ ] Pretty cli application
Target: A comprehensive mutational signature analysis platform
Data/Method Structure Design
Features